Collinsella aerofaciens: CSV91_03325
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Entry
CSV91_03325 CDS
T05143
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
caer
Collinsella aerofaciens
Pathway
caer03030
DNA replication
caer03430
Mismatch repair
caer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSV91_03325 (holA)
03430 Mismatch repair
CSV91_03325 (holA)
03440 Homologous recombination
CSV91_03325 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caer03032
]
CSV91_03325 (holA)
03400 DNA repair and recombination proteins [BR:
caer03400
]
CSV91_03325 (holA)
Enzymes [BR:
caer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSV91_03325 (holA)
DNA replication proteins [BR:
caer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSV91_03325 (holA)
DNA repair and recombination proteins [BR:
caer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSV91_03325 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ATP53648
UniProt:
A0A2D1TWA5
LinkDB
All DBs
Position
complement(746615..747577)
Genome browser
AA seq
320 aa
AA seq
DB search
MSETGLLPAYLIVGTDGVKRDHAVSRMKARLEKSGMVEFNLDERDMTKDPDIESIIGSLN
TFPMGSEFRLVILDGCSKLAKAVSEPLVEYLASPSPTTVCLIIADSLAKNTRLYKAIAKI
DKKAVIDCSGTKRWELPRRVQQMATQHGKSISTAAAEELVSRSGENTRMLDNDLAKLAQM
VESPQIELADVERWIVRTAEVQPWDFLNAVSARDMRRSLELFKLLPSKSYVWTYTLLCGR
IRELIVAKALDARGQGRELAATLKLQSWQVKNHLTWARRFSMAELVAALEGAVDVELALK
GSADSQTALLLWITNILRKS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaccggtctgctgccggcatatctgatcgtcggtaccgacggagtcaagcgc
gatcacgccgtctcgcgtatgaaagcgcgtctggaaaagtcgggtatggtcgagttcaac
ctcgacgagcgcgacatgaccaaggaccccgatatcgagtctattatcggatcgcttaac
acctttcccatgggcagcgagtttcgcttggtaatccttgatggctgctcaaagctcgcc
aaggcggtctcggagccgctcgtcgagtatctggcgagtcccagccccacaacggtctgc
ctcattatcgccgactcgcttgccaagaacacacgcctgtataaggcgattgccaagatc
gacaagaaggccgtgatcgattgctccggcaccaagcgctgggagctaccgcgccgcgtg
cagcagatggcgacacagcacggcaagtcgatctcgacggcggccgccgaggagctcgtc
tcgcgttcgggtgaaaacactcgcatgctcgataacgacttggctaagcttgcccagatg
gttgagtcgcctcagattgaacttgccgatgttgagcgctggatcgtacgtacggccgag
gttcaaccctgggacttcctcaacgccgtctcggctcgcgatatgcggcgatctctcgag
ctctttaagcttttgccctccaagagctacgtgtggacctacacgctgctatgcggtcgc
atccgtgaactgatcgtcgccaaggcgctcgatgcgcgcggacagggtcgtgagctggcc
gcaacgctcaagctccagtcctggcaggtcaagaatcacctgacctgggcacgtcgcttt
tcgatggcagagctcgttgccgcgctcgagggcgcggtcgatgtggagctcgcactgaag
ggttcggccgattctcagaccgcgcttttgctctggattacgaacatcttgagaaaatcg
tga
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