| Entry |
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| Name |
(GenBank) DNA polymerase III subunit alpha
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| KO |
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| Organism |
caer Collinsella aerofaciens
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:caer00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSV91_04435
03430 Mismatch repair
CSV91_04435
03440 Homologous recombination
CSV91_04435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:caer03032]
CSV91_04435
03400 DNA repair and recombination proteins [BR:caer03400]
CSV91_04435
Enzymes [BR:caer01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSV91_04435
DNA replication proteins [BR:caer03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSV91_04435
DNA repair and recombination proteins [BR:caer03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSV91_04435
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1009910..1013713)
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| AA seq |
1267 aa
MAFVHLHNHTVFSMLDGATRIQDMVNRAVELGMPAVAITDHGYMYGVPDLALACDAVNHN
TPEYKTWSHDKAFLEKDRRDELVEPDPEENPREHAQYVKDMAMWDEKGNIDELKPPLVIK
PIFGCEVYFTPDETLARDHKPELYHMILLAKDQEGYVNLMQTVSEAAVQGFYYKPRVTLD
NLRRHAKGMICTSACIAGIIPKYIDRGDMEGAIKWAETFRDTFDPGDFYIEIQEHGITTD
NGLTDEQMDRTLIDIAKQVGVKVIATNDFHYLRREDAPVQDVIMCIGMNAKVDDPNRMRM
TGSEFYMKTEEEMRAMFPYCPEACDNTLEIADKCYVELDWDSIILPRFPLLDPGETHESQ
FRRECEKGLRQHYGDDWATREIGGVNIKERFEYEYKVICDKGFAAYFLIVAEYVQWAKDN
GIGVGPGRGSAAGAIVAYAMNITAFDPLENGLMFERFLSPQRTEMPDIDMDFDDERRLEV
VEHVRQLYGPEKVTHVITYSTIKAKQAINDAARVLDYPVYMGQRLSKMVSSDPKVKLKQV
LEKQPGKEDLFNPDFAEAYKKDDDARRIIDTALSIEGLTRGEGVHACAVLICRDPVNEHV
PTKLDTKGGVEITQYEGHTVADMGLLKMDFLGLRTLTVISKAKANIKKNFGIDIKEEEIP
FDDPEIFKLMGSGHTAGVFQVESAGMTATIKNMKPTEYKHVVALIALYRPGPLGAGMVSS
YINRMNGKEPAVSYDDRLDDILGETYGTMVYQEQVMLISVEMCGFSKGESDSRIRKPVAK
KKIKLLTSTVLHWEDGSDETTYDHWMNGAIKNNYTREVAQKIWDDVLEFASYAFNKSHSA
GYAILVMQTAWLKAHYPHEYMAAVLTSYTGKTDKIVHYVSACRHDGIPVLSPDVNESGTE
FTATKEGVRFGLAGIRGVGTGVAQAIIAEREAGGPFKTLHDFVERVDSSQANRRVIESLI
KAGAFDSTGYPRRQMMHFVDKNNPENIIDAAIKRQKDRASGQTSFFDMFGDVEGSGFEVS
VPDPDGQEWDRHLKLSQEKEVLGIYVSDHPLRPFEYALAKARDFSFSQIDTGYEVQNPTG
GTINQEIPEGKALWWAGMVSSVSKRVTKNGDPMGIVQLEDMEGEATVVVFPKTYKEAEGY
LYGEVDPETGAQLSDAFVRIKGKLERSDRGDQIIAQEIVPLELNEENNKPKVFEVMVPNS
RFSQGNMARLATVLTANPGGDRVEIFIEQVDGRVLRAEVPAKVNARSIPLLAEAKAIVGN
QGRVTVI |
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| NT seq |
3804 nt +upstreamnt +downstreamnt
atggcattcgtccatctgcacaatcacactgttttctccatgctcgacggcgcaacccgt
atccaggatatggtcaatcgcgccgtagagctgggcatgcccgccgtggccattaccgac
cacggctacatgtatggcgtgcccgatctggcgctggcctgcgacgccgtcaaccacaat
acgcccgagtacaaaacttggagccacgacaaggccttcttggaaaaggaccgccgcgac
gagctggtggagcccgatcccgaggaaaacccgcgcgagcatgcccagtatgtgaaggac
atggccatgtgggacgaaaagggcaacatcgacgagctcaagccgcccctggtcatcaag
cccatctttggctgcgaggtctactttacgccggacgagacgctcgcccgcgaccataag
cccgagctctaccacatgatccttctggccaaggaccaggagggctacgtcaacctgatg
cagacggtctccgaggccgctgtgcagggcttttactacaagccgcgtgtgacgctcgac
aacctgcgccgccatgccaagggcatgatctgcacgagcgcctgcattgcgggcatcatt
cccaagtacatcgaccgcggtgacatggagggcgccatcaagtgggccgagaccttccgc
gacaccttcgatcccggcgacttctatatcgagatccaggaacacggcattaccaccgac
aacggcctgaccgacgagcagatggaccgcacgctcatcgacattgccaaacaggtgggt
gtcaaggtcatcgccaccaacgacttccactacctgcgccgcgaagacgcgcccgtgcag
gacgtcatcatgtgtattggtatgaacgccaaggtcgacgaccccaaccgcatgcgcatg
accggctctgagttttacatgaagaccgaggaggagatgcgggcgatgttcccgtattgc
cccgaggcctgcgacaacacgctcgagatcgccgacaagtgctacgttgagctggactgg
gactccatcatcctgccgcgcttcccgctgctcgatcccggcgagacgcacgagagccag
ttccgccgcgagtgcgagaagggcctgcgccagcactacggcgacgactgggccacgcgc
gagatcggcggcgtcaacatcaaagagcgctttgagtacgaatacaaggtcatctgcgac
aagggctttgccgcctactttttgatcgttgccgagtacgtgcaatgggccaaggacaac
ggcatcggcgtcggccccggccgtggctcggccgccggcgctatcgtcgcctacgccatg
aacatcaccgcgttcgacccgctcgagaacggtctgatgttcgagaggttcctgtccccg
cagcgtaccgagatgcccgatatcgatatggacttcgacgatgagcggcgcctcgaggtc
gtggagcacgttcgccagctctacggccccgagaaggtcacccacgtcatcacctactcg
accattaaggccaagcaggccatcaacgacgccgcgcgcgtcctagactacccggtctac
atgggccagcgcctgtccaagatggtctcgagcgaccccaaggtcaagctcaagcaggtg
ctcgaaaagcagcccggcaaagaggatctgtttaaccccgattttgccgaggcctataaa
aaggacgacgacgcccgccgcatcatcgacacggcgctctcgatcgagggcctcacccgt
ggcgagggcgtgcacgcgtgcgccgttctgatctgccgcgaccccgtcaacgagcacgtg
cccaccaagctcgacaccaagggcggcgtcgagattacccagtacgagggccataccgtc
gccgacatgggcctgctcaagatggacttcctgggcctgcgcacgctgacagttatctcc
aaggccaaggcaaacatcaaaaagaacttcggcatcgacatcaaagaggaagagattccc
tttgacgaccccgagatctttaagctcatgggctccggccacaccgccggcgtcttccag
gtcgagtccgccggcatgacggccacgatcaagaacatgaagcccaccgagtacaagcac
gtcgtggcattgatcgctctgtaccgcccgggcccgctgggcgccggcatggtctcgtcc
tacatcaaccgtatgaacggcaaggagccggccgtctcctacgacgaccgcctggacgac
atcctgggcgaaacctacggcaccatggtctaccaggagcaggttatgctcatctccgtc
gagatgtgcggcttctccaagggcgaatcggactcgcgtatccgtaaacccgtggctaaa
aagaagatcaagctgctcacgtcgacggtgctccactgggaggatggctccgacgagacc
acctacgatcactggatgaacggcgctatcaagaacaactacacgcgcgaggtcgcccag
aagatttgggacgatgttctcgagttcgcatcttacgccttcaacaagtcgcactctgcc
ggctacgccatcttggttatgcagacggcgtggctcaaggcgcactatccgcacgagtac
atggcggccgttctgacgtcctatacgggtaagaccgacaaaatcgtgcactacgtctcg
gcatgccgtcacgacggcatccccgtgctttcgccagatgtcaacgagtccggcaccgag
ttcacggctaccaaggaaggcgtgcgctttggtctggccggcatccgcggcgtgggcacc
ggcgtggcgcaggcgattatcgccgagcgcgaggcgggcggtccgtttaagacgctgcac
gactttgtcgagcgcgtggactcgagccaggcaaaccgtcgcgtgattgagtcgctcatc
aaggcaggtgccttcgactccacggggtatccgcgtcgccagatgatgcactttgtggat
aagaacaaccccgagaacatcatcgatgccgcgataaagcgccagaaggaccgcgcgagc
ggccagacctcgttcttcgatatgtttggcgacgttgagggctcgggctttgaggtgagc
gtgccagatccggacggccaggaatgggaccgccacctcaagctgagccaggagaaagag
gttctgggcatctatgtctcggaccacccgctgcgcccgtttgagtatgcgctcgccaag
gcgcgcgacttttcgttctcgcagatcgataccggctacgaagtccagaatcctacgggc
ggcaccatcaaccaagagattcccgagggcaaggcgctgtggtgggccggcatggtctcg
agcgtgtccaagcgcgtgaccaaaaacggcgaccccatgggcatcgtgcagctcgaggac
atggaaggcgaggccaccgtcgtggtgttccccaagacctataaggaggccgagggttac
ctgtacggcgaggtcgatcccgagaccggcgcacagctgtccgacgcctttgtgcgcatt
aagggcaagctcgagcgctcggaccgcggcgaccagatcatcgcgcaggagatcgtgcct
cttgagctcaacgaggagaacaacaagcccaaggtgtttgaggtcatggtgcccaacagc
cgctttagccagggcaatatggcgcgtcttgccacggtgctcaccgctaacccgggcggc
gatcgcgtggagatctttatcgagcaggtggacgggcgcgtgctgcgcgccgaggtgcct
gccaaggtcaacgcgcgctcgattccgctgctggccgaggccaaggccatcgtgggtaac
caaggccgcgtgacggttatctag |
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