Collinsella aerofaciens: CSV91_04450
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Entry
CSV91_04450 CDS
T05143
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
caer
Collinsella aerofaciens
Brite
KEGG Orthology (KO) [BR:
caer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caer03400
]
CSV91_04450
Enzymes [BR:
caer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSV91_04450
DNA repair and recombination proteins [BR:
caer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CSV91_04450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ATP53848
UniProt:
A0A2D1TWV2
LinkDB
All DBs
Position
complement(1015904..1019536)
Genome browser
AA seq
1210 aa
AA seq
DB search
MDLSTLMPQQLQIVKTLDRPLFVSAGAGSGKTFTLTRRIVYALSPESGPFVEHLDQVLAI
TFTKDAAAEIRDRVRRALIDEGMDEEALTVDDAWISTIHGMCSRILRAHALELGIDPEFT
VLTDTDELMDQAVEHVLGRATAPDAAPELAASLKALYAWYPMAGEGGPFGAGTTIKGLVR
DLLELSSQLPGGMDDVRVARGQADTSALADAYRAALGASKATTEKAQVALDAIDAFEASG
KTMEDAARLMMSCSMPRASKAFPKEQVELLKAEAADAFINIVLACGGPALDALVGLARAV
EAEYRALKADQSALDNNDLLRMAYEALRDYPAIRAAYEGRFKMVMIDEFQDTDQMQVDLI
RYLTGAGERALCTVGDAQQSIYRFRGAEVEVFRRQERKVGSSAAPETAAASDAPAGELVK
LVRNFRSHDEVLRYVARVFDGDTGGLMQGFLDLEPSDKREDKLKAKASRRQALFVAGGST
QERTQAKARAIAERFQALVKAGQPQGDMVLLLGRMTNADVYAQAFRDQGLDCVIAGGSVF
AQAAEVQTVRALVCALANPADTVQGLMPLLASPMFALGAQEFLALATKLDEQTGETSRRN
IDVGIMSDSDVPGLQNLPLVTRAREVLRYALRRVGRDSFAAIARDVVNASGWFVRLAQRG
PEGKAIAANVLKALDAVAEAEAEFGNSPRSIALAFDRFLAGKEAPGALNEEGDGAVRIMT
VHASKGLEYPVVAVAECFGVRKSSGAAQMGRVEGGAQVVALPARFDGVKLADGTFVKGDD
VKKQFEHSFKGKGTSLWLPPELMEDVCATGSPAEAFARLRNADLQLSLEERARLLYVAMT
RARELVILAMDAGVSRGKVTAPTFDVETDLTYDVLRRILPTDSLDMPQLDSDRLVFDNSQ
PGDYELISLADFTFGEQAFEVNASLDVEGRLVRGDAEPEGAGADARAAVPGPADPEPDAF
ELVYPQAVGVRMGTCPYPARDSYSYSSIAAALHAESEDRAAEAHMPMDEAGDDAESDGSE
MADADVAAVEPAGNPMALGSAFHAACQWLIEMGADELPAARADALARLWRLTPEQRERFD
VALDRWLKSAVRAELLAWPCVRAEVPFFSLGCEDEDIARYGAYAEGAIDALATNPADSSR
ALVIDYKTGGTPDETPEQLQEKHALQARVYADVLHKAGFEAVTVKFVRVEQANPAIFVEP
AEPQVVTYNL
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggatctttcgaccttgatgccgcaacagctgcagatcgtcaagacgctcgaccgtccg
ctgtttgtctcggcgggcgccggctcgggcaagacctttaccctcacgcgccgcatcgtc
tatgcgctctcgcccgaatccggtccgttcgtcgagcatctggaccaggtgctcgccatc
acctttaccaaggatgctgcggccgagattcgcgaccgcgtgcgccgtgcgcttatcgac
gagggcatggacgaggaagcgctgaccgtcgacgacgcgtggatttcgaccattcacggc
atgtgctcgcgtatcctgcgcgcgcacgcgttggagttgggcatcgaccccgagttcacg
gtgcttaccgataccgatgagcttatggatcaggctgtcgagcatgtgctggggcgcgcg
acggcgcccgatgccgcgcctgagctcgccgcctcgcttaaggccctctacgcttggtat
cccatggcgggcgagggcgggccgtttggcgccggtaccaccatcaaaggcctggtgcgc
gacctgttggagctatcgagccagctgccgggcggcatggacgatgtgcgcgtggcacgc
ggccaggccgacacctcggcgcttgccgatgcctatcgtgcggcgctgggtgcgagcaag
gccacgaccgagaaagcacaggtggcactcgacgccattgacgcgttcgaggcgagcggc
aaaaccatggaggatgcggcgcgactcatgatgtcgtgcagcatgcctcgggcgagcaag
gcgtttcctaaggagcaggtggagctgctcaaggccgaagcagccgatgcgtttatcaat
atcgtgcttgcctgcggcggcccggcgctcgatgcgctggtggggctagcccgtgccgta
gaggcggagtaccgtgcgcttaaggccgaccagtccgcgctcgacaataacgacctgttg
cgcatggcatacgaggcgctgcgcgattatcccgccatccgagctgcctatgagggccgc
tttaagatggtcatgatcgatgagttccaggataccgaccagatgcaggtcgatttgatt
cgctatctgacgggcgcgggggagcgcgcgctgtgcaccgtgggcgatgcgcagcagtcg
atctaccgcttccgtggcgccgaggtcgaggtattccgtcgccaggagcgcaaggtgggc
tcctctgctgcgcccgagacggctgccgcatccgatgcccccgccggcgagctcgtcaaa
ctcgtgcgcaacttccgtagccacgacgaggtgctgcgctacgtagcacgcgtctttgac
ggcgacaccggtggtttgatgcaggggttcttggatcttgaaccgagcgacaaacgcgag
gacaagctcaaggcaaaggcgtcgcgccgccaggcgctgttcgttgccggtggcagcacg
caggagcgaacgcaggcgaaagctcgtgcgattgcggagcggttccaagcgctcgtcaaa
gcggggcagccccagggcgatatggtgttgctgctgggtcgcatgaccaacgccgatgtc
tatgcgcaagctttccgtgaccaagggctcgactgtgtgatcgcaggcggctcggtcttt
gcccaggcagccgaggtgcagacggtgcgtgccctggtctgcgcgctcgccaatccggct
gatacggtccaaggccttatgccgttgctggcctcgccgatgtttgcactcggcgcccag
gagttcctggcgctggcgaccaagctcgacgagcagacgggcgagacgtcgcgccgcaat
atcgatgtgggcatcatgagcgattccgatgtgccgggtttgcagaacctgccgctcgtg
acgcgtgcccgcgaggtgctgcgctacgcgcttcgtcgcgtgggacgcgactcgttcgcc
gccatcgcgcgcgacgtggtcaacgcctccggctggttcgtgcgtctggcgcagcgcggc
cccgagggcaaggccattgccgccaacgtgctcaaggcgctcgacgccgtggccgaggca
gaggccgagttcggcaactcgccgcgctccattgcgctcgccttcgaccgcttcttggcg
ggcaaggaggccccgggcgccctcaacgaggaaggtgacggcgcggtgcgcatcatgacg
gtgcatgcctccaagggtctggaatatccggtcgtggcggtcgccgagtgctttggcgtg
cgtaagtcctcgggtgcggcacagatgggtcgcgtcgagggcggagcgcaggtcgtggca
ctgccggcacgcttcgacggcgttaagctcgccgacggcacgttcgtaaagggcgatgac
gtcaaaaagcagtttgaacactcgtttaagggcaagggcacgtcactgtggttgccgcca
gagcttatggaggacgtctgcgcgacgggctctcccgccgaggcgtttgcccgcctgcgc
aacgccgacctgcagctttcgctcgaggagcgggctcgtctgctctatgtcgccatgacg
cgagcgcgcgagttggtcattttagcgatggacgccggcgtgagccgcggcaaggtgacg
gcgccgaccttcgatgtcgagacggatctgacctacgacgtgctgcgccgcatcctgccg
accgacagtctggacatgccgcagctcgatagcgaccgtttggtgttcgacaactcccag
ccgggcgactacgagctcatctcgctggcggactttacgtttggcgagcaggcgtttgag
gtcaacgcttcgctggatgtcgagggcaggcttgtccgcggcgatgcggagccggagggt
gccggtgcggatgcccgcgccgccgttcccggtcctgccgaccccgagcccgatgcgttt
gagctcgtgtatccccaggcggtgggcgtgcgcatgggcacctgcccgtatccggcgcgc
gattcgtacagctactcgtcaattgccgcggcgctgcatgccgagtccgaggaccgtgcc
gccgaggcacacatgcccatggacgaggccggcgatgatgcggagtcggatggttccgag
atggccgatgcggacgtggccgccgttgagcccgccggcaaccccatggcgctgggctcg
gcgttccatgccgcctgccagtggctgatcgagatgggtgccgatgagctgcccgccgcg
cgtgccgatgcactggcgcgtctgtggcgcctgacgccggagcagcgcgagcgcttcgac
gttgccctggaccgctggctcaagtcggcggtccgtgccgagctgcttgcctggccgtgc
gttcgcgccgaggtgccgttcttttcgctgggctgcgaggacgaggacatcgctcgctac
ggtgcatatgccgaaggcgccatcgacgctttggcgacgaacccggcggattcgtcacgc
gcgctggtcatcgactacaagacgggcggcacaccggacgagacgccggaacagctgcag
gagaagcacgccctgcaggcgcgcgtctacgctgatgttctgcacaaggcgggctttgag
gccgtgaccgttaagttcgtccgcgtggagcaggcgaatccagccatcttcgtcgaaccc
gccgaacctcaagtagtcacctacaacctctag
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