Citrobacter amalonaticus FDAARGOS_165: AL524_01890
Help
Entry
AL524_01890 CDS
T04738
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AL524_01890
Enzymes [BR:
caf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AL524_01890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
Motif
Other DBs
NCBI-ProteinID:
AMG51947
LinkDB
All DBs
Position
complement(320942..322930)
Genome browser
AA seq
662 aa
AA seq
DB search
MRVSRSLTIKQMAMVAAVVMVFVFLFCTVLLFHLVQQNRYNTATQLESIARSVREPLSAS
ILKADIPGAEAILASIKPAGVVQRADVVLPNQFQALRMSFIPERPVPVMITRLFELPVQI
SLPVYSLERPANPQPLAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLMLTVAISWCVNR
LILHPLRKIARELNNIPQQDLIGHQLALPRLHYDDEIGLLVRSYNLNQQLVQRHSEEQTD
NAMRFPVSDLPNKAFLMGLLEQVVSRQHTTALMIVTCETLRDTAGVLKEAQREILLLTLV
EKLKSVLSPRMVLAQISGYDFAIIAHGVKEPWHAITLGQQVLTIINERLPVQGIQLRPSC
CIGVAMYYGDLSAEQLYGRAVSAAFTARRKGKNQIQFFDPEQMEIAQKRLTEESDILTAL
DNHRFALWLQPQVEMSSGNVVSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVL
EESCRQLAAWQERGITLPLSVNLSALQLMHPNMVSDMLELLNRYRIQPGTLILEVTESRR
IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVDGLPED
NSMVSAIILLARSLNLQMVAEGVETEAQREWLAQAGVEIAQGFLYARAVPAETFEERYLK
HN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcagtcgctcgttaacaattaagcagatggcaatggtggctgccgttgtcatg
gtgtttgtgtttctgttttgtaccgttttgctgtttcatctggtgcagcagaaccgctac
aacacggcgacgcaactggaaagtattgcccgttcggtacgtgaaccgctgtctgcctca
attttaaaagccgatattcccggagccgaagcgattcttgccagtatcaaaccggcgggg
gtggtgcaacgggccgatgtggtgctaccgaatcagtttcaggcgctgcgcatgagcttt
atccctgaacggcccgttccggtcatgataacccgactcttcgaactgccggtgcagatc
tcgctgcctgtctattcacttgaacgtcctgcaaatccgcaaccgctggcatatctggtg
ctccaggccgactcattccgcatgtataagtttgtgatgagcacgctgtctacgttagtg
accatttacttacttttatccctgatgctaacagtcgccattagctggtgcgtgaatcgc
ctgattttgcacccgctgcgcaaaattgcccgcgagctgaataacattccgcaacaggat
ttgattggacatcagctggcgttgccgcgtctgcattatgacgatgagattggtctgctg
gtgcgcagctacaacctcaatcaacaactggtccagcgccacagcgaagagcagacggat
aacgcgatgcgttttccggtctctgacctgccgaacaaagcgttcctgatggggctgctc
gagcaggtcgtgtcgcgtcagcacaccacggcgctgatgattgtcacctgtgaaacgctg
cgcgatacggcgggcgtgctgaaagaggcgcagcgggaaattctgctgctgacgctggtg
gagaaactgaaatcggtgctgtcaccgagaatggtgctcgcgcagatcagcggttacgat
tttgccattatcgctcacggcgtcaaagagccgtggcacgcgatcacattaggtcagcaa
gtactcactatcatcaatgagcgattgccggtgcaggggatccaacttcgcccaagctgc
tgcattggtgtggcgatgtattacggcgatctcagcgccgaacagctctacgggcgcgcg
gtatccgcagcgtttaccgcccggcgcaagggcaaaaatcagattcagttcttcgatcct
gagcagatggaaatcgcccagaaacggctgaccgaagagagcgatattctcaccgcgctg
gacaatcaccgctttgccctctggttgcagcctcaggtggagatgagcagcggcaacgtg
gtcagcgccgaagcgttgctgcgtatgcagcagcccgacgggagctgggaattgccggaa
gggttgattgagcggattgagtcctgcggcctgatggtcaccgtgggccactgggtgttg
gaagagtcttgtcgtcagctcgcagcctggcaggaacgggggatcacgctgccgctgtcg
gtcaatctgtcagcactccagttgatgcacccgaatatggtgtcagacatgctggaactg
ttaaatcgttatcgtatccagccgggtacgctcattctggaagtgacggagagtcggcgg
atcgacgacccgcatgccgccgtggcgatactgcgtccgttgcgtaacgccggcgtgcgt
atcgcgctggacgattttggcatgggctacgcggggctgcgccagctccagcacatgaaa
tccctgcccatcgacgtgctgaaaatcgacaaaatgtttgtcgatggcctgccggaagat
aacagcatggtctcggcgattatcctgctggcgcgcagtctgaatttgcagatggtggcg
gaaggcgtcgagaccgaagcgcagcgtgaatggctggcgcaggcgggggttgaaatcgct
cagggcttcctttatgcccgtgcggtacccgctgaaaccttcgaagaacgttatctaaag
cacaattga
DBGET
integrated database retrieval system
