Citrobacter amalonaticus FDAARGOS_165: AL524_02400
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Entry
AL524_02400 CDS
T04738
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Pathway
caf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL524_02400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caf03400
]
AL524_02400
Enzymes [BR:
caf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AL524_02400
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AL524_02400
DNA repair and recombination proteins [BR:
caf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AL524_02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AMG52038
LinkDB
All DBs
Position
complement(434720..435529)
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLVGATILHANVRNGRLRWPVSEEIYRLSDKPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILPEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSDTFNGEYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSPAEYELLVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRVCGTPIVASKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtcgaaaccagccgccgcggtattgaaccgcatctggtcggg
gcaaccattctgcatgccaatgtgcgtaatggacgtctgcgttggccggtatcagaagag
atctatcgtctgagcgacaaaccggtgctcagcgttcagcgccgtgcgaaataccttctg
ctggagctacccgatggctggatcatcattcacctggggatgtcaggcagtctacgtatc
cttcctgaagaactgcctgcagaaaaacatgaccatgtcgatttagtgatgagtaacggt
aaagtcctgcgctacaccgatccccgtcgctttggtgcctggctgtggacgaaagaactg
gaagggcacaacgtactggcgcatctcggtcctgaaccgctaagcgatactttcaacggc
gaatacctgcaacagaaatgtgcgaagaagaaaacggcgattaaaccctggttgatggat
aataagctggtcgtgggggtcggaaatatctacgccagtgaatctctgtttgctgcgggt
attcatcctgaccgtctggcgtcgtcattgtcgccggctgaatatgaactgctggtgcgc
gtgattaaggccgtcctgctgcgttcaatagaacaggggggaacgacgctgaaagatttt
ctgcaaagcgatggtaaaccgggctattttgctcaagagttgcaggtctatggccgtaaa
ggtgagccatgcagagtgtgcggaacgccgatcgtagcatcgaaacacgcgcagcgtgcg
acgttctattgccgtcagtgccagaagtaa
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