Citrobacter amalonaticus FDAARGOS_165: AL524_03390
Help
Entry
AL524_03390 CDS
T04738
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Pathway
caf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL524_03390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caf03019
]
AL524_03390
Enzymes [BR:
caf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AL524_03390
Messenger RNA biogenesis [BR:
caf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AL524_03390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMG52212
UniProt:
A0AAP5RSZ9
LinkDB
All DBs
Position
complement(660710..661978)
Genome browser
AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQTTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPEALMNNLPKPLRLTRTRPGNGPRRSGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccaaaggtt
atcgaagcccttgaaaataaaggatttcataactgcacgcccattcaggccctcgcactg
ccgcttacgctggctggtcgcgatgttgcagggcaggcgcaaaccggtaccggaaaaacg
atggcgttcctgacgtcaacgtttcattatcttctctctcatcccgcgattgacgatcgc
aaggtgaaccagccacgcgccttaattatggcgccgacgcgtgagttagccgtgcagatc
cacgctgatgccgagccgctggcacagacgaccggtctgaagctgggtctcgcttacggc
ggtgacggttacgacaaacagctaaaagtgctggaaagcggcgtcgatattctcatcggc
accacgggtcgtctgatcgattacgcgaaacagaatcacatcaacctgggcgccatccag
gtggtggtcctcgatgaagccgatcgcatgtacgatctgggctttattaaagatattcgc
tggctgttccgccgcatgccgccggccaaccaacgcctgaacatgttgttctctgctacc
ctctcttaccgcgtgcgtgaactggcgttcgaacagatgaacaacgccgaatacgttgaa
gtcgagccggaacaaaaaacgggtcaccgtattaaagaagagcttttctatccgtctaac
gaagagaaaatgcgcttactgcaaacgctgatcgaagaagagtggccggatcgcgccatc
atcttcgcgaacaccaaacaccgctgcgaagatatctggggtcatcttgccgccgatggt
catcgcgttggtttgctgactggcgatgtggcgcagaaaaaacgtctgcgtattctcgat
gaatttacccgtggcgatctggatattctggtcgcaaccgatgttgccgcgcgcggcctg
cacattcctgccgtgacgcacgtatttaactacgatctgccggacgattgcgaagactac
gtacaccgcatcggtcgtacgggccgtgctggtgcaagcggtcactcgatcagcctggcc
tgtgaagagtacgccctgaacctaccagcgattgaaacctacattggtcactcgattccg
gtgagtaaatacaacccggaagcgttgatgaacaatctgccgaagccgctgcgcctgacg
cgtacgcgccctggcaatggcccgcgccgctctggcggtgctccgcgtaatcgtcgtcgt
tcaggttaa
DBGET
integrated database retrieval system
