Citrobacter amalonaticus FDAARGOS_165: AL524_03545
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Entry
AL524_03545 CDS
T04738
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Pathway
caf03420
Nucleotide excision repair
caf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AL524_03545
03430 Mismatch repair
AL524_03545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caf03400
]
AL524_03545
Enzymes [BR:
caf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AL524_03545
DNA repair and recombination proteins [BR:
caf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL524_03545
MMR (mismatch excision repair)
Other MMR factors
AL524_03545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
DMP19
Motif
Other DBs
NCBI-ProteinID:
AMG52239
UniProt:
A0AAP5RT98
LinkDB
All DBs
Position
690965..693127
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLTVENNSPYSIMAV
TFTNKAAAEMRHRIGQIMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQAMWYINGQKDEGLRPHHIQSFGNPIEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVEGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRATISRPVSHQRMG
TPMAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttatctgctcgacagcctcaatgataaacagcgcgaagcggtggccgcg
ccacgtagcaacatgctggttctcgcgggggcagggagcggtaagacacgcgtactggta
caccgtatcgcctggctgctgacggtagaaaataactcgccgtattcgattatggcggta
acctttaccaataaagcggcggcggagatgcgtcatcgtatcggccagattatgggcacc
agccagggcggcatgtgggtcggcactttccacggtctggcgcaccgactgttgcgcgcg
catcacatggatgcgaatttgccgcaggattttcagatcctcgacagcgaagaccagttg
cgtctgctcaagcgtctgattaaggcgatgaacctcgacgagaagcagtggccggcgcgt
caggcgatgtggtacatcaacggacagaaagacgaaggtctacgcccacatcatattcag
agtttcggtaacccgattgagcagacctggcagaaggtgtatcaggcctatcaggaagcg
tgcgatcgtgcggggctggtggattttgccgaactactgctgcgcgcgcatgagctgtgg
ctcaacaaaccgcatattcttcagcactaccgcgaacgtttcacgaatatcctggtggac
gaattccaggataccaacaacatccagtatgcctggatccgtctgctggctggcgatacc
ggcaaagtgatgatcgtgggcgatgacgaccagtcgatctacggctggcgcggcgcgcag
gtagaaaacatccagcgcttcctgaacgacttccccggtgcgcaaaccatccgtcttgag
cagaactaccgctcaaccagtaatattctcagcgcggcgaacgccctgatcgagaacaac
aatgggcgtctgggtaaaaagctgtggaccgatggcgtcgaaggcgagcccatttcactc
tactgcgcgtttaacgagctggatgaagcgcgctttgtcgtcaaccggatcaaaacttgg
caggacaacggtggcgcgctggaacagtgtgctattctctaccgcagtaacgcccagtcg
cgtgtgctggaagaggcgctgctacaggccagtatgccgtaccgcatatacggcggcatg
cgcttcttcgagcgtcaggaaatcaaagatgcactctcttatctgcgcctgattgcgaac
cgcaatgatgacgccgcctttgaacgcgtggtgaataccccgacgcgcgggattggcgat
cggacgctggacgtggtgcgccagacgtcacgcgatcgccagctcacgttgtggcaggcg
tgccgcgaactgttgcaggaaaaagcgctggccggtcgtgccgccagtgcgctgcaacgc
tttatggaactcattgacgcactggcgcaggaaacggcagatatgccgctgcacgtgcag
actgaccgggtgattaaagattccggcctgcgcatgatgtacgagcaggagaaaggcgag
aaaggtcagacccgcatcgagaacttagaggaactggtgacggcgacgcgccagttcagc
tacaacgacgaagacgaagatctgatgccgttgcaggcctttctctcccatgcggcgctg
gaagcgggcgaagggcaggcggatacctggcaggatgcggtacagctcatgacgctgcac
tcggcgaaagggctggagttcccgcaggtgtttatcgtcgggatggaagaggggatgttc
cccagccagatgtcactggatgagggcggacgccttgaagaagagcgtcgtctggcctat
gtcggcgtgacccgtgcgatgcagaaactgaccctaacctatgccgaaacgcgtcgcttg
tatggcaaagaggtgtatcaccgtccgtcgcgcttcatcggtgagttgccggaagcgtgc
gttgaagaggtccgtctgcgtgcaacgatcagccgtccggtgagccatcagcggatgggg
acgccgatggcggaaaacgacaccggttacaagctgggccagcgtgtgcgccatgctaag
ttcggcgagggcaccattgtgaatctggagggcagcggcgaacacagccggttgcaggtg
gctttccagggacagggaattaaatggctcgttgctgcgtatgcgaagttagaaacggtc
taa
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