Citrobacter amalonaticus FDAARGOS_165: AL524_03570
Help
Entry
AL524_03570 CDS
T04738
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Pathway
caf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL524_03570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caf03019
]
AL524_03570
03400 DNA repair and recombination proteins [BR:
caf03400
]
AL524_03570
Enzymes [BR:
caf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AL524_03570
Messenger RNA biogenesis [BR:
caf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AL524_03570
DNA repair and recombination proteins [BR:
caf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AL524_03570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AMG52244
UniProt:
A0AAW9M6B8
LinkDB
All DBs
Position
697052..698881
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEAIIDTVVSGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVAL
TATADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGVKDAQIAL
STIGRVNQRFGMGYVVEVIRGANSQRIRELGHDKLKVYGMGREQSHEHWVSVIRQLIHLG
FVTQNIAQHSALQLTDASRPLLRGEVTLQLAVPRIVALKPRVMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKAFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgaatctggaatctggagctaagcaggttttgcaagaaacc
tttggctaccagcagtttcgcccgggtcaggaagcgatcatcgacaccgtcgtttcgggg
cgcgactgcctggtcgtgatgccgaccgggggcggaaaatccctctgctatcaaatccct
gccttactgctcaacggcctgaccgtggtggtttcgccgctgatttccctgatgaaagat
caggtcgaccaactgctggcgaacggcgtggcggccgcttgtctgaattcgacgcaaacc
cgtgagcagcagcttgaagtgatgacggggtgtcgtaccggacaaatccgtctgctgtat
atcgctcctgaacgcctgatgctggataacttccttgagcacctggcgcactggaatccg
gtgttactggccgtggacgaagcgcactgtatctcgcagtggggacatgatttccgcccg
gaatatgccgcactcggccagctcagacagcgttttcctacactgccatttgtcgcgctg
accgcgaccgctgatgaaaccacacggctggatattgttcgtctgctgggactgaacgat
cccttaatccagatcagcagttttgaccgtccgaacattcgctacatgctgatggagaag
tttaaaccgctcgatcaactgatgcgttacgtgcaggaacagcgtggtaaatccgggatt
atttactgtaacagtcgtgcgaaagtggaggacaccgccgcgcgtctgcaaagccggggc
attagcgccgcggcataccatgcagggctggaaaatcacatccgcgccgacgtgcaggag
aaattccagcgcgacgacctgcaaatcgtggtggcgaccgtcgcttttggcatgggcatc
aacaaacctaacgtgcgttttgtggtgcatttcgatattccccgcaacattgagtcctac
taccaggagaccggtcgtgccgggcgagacggcctgcccgcggaggcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgtctggaagaaaaaccgcagggacagcta
caggatatcgaacggcacaagttgaacgcgatgggcgcgtttgccgaggcgcaaacctgt
cgtcgtctggtgctgcttaactacttcggtgaagggcgtcaggaaccgtgcggcaactgc
gatatctgtcttgatccgccaaaacagtatgatggcgtgaaggacgcacagattgcgctc
tcgaccattggtcgggtaaaccagcgttttgggatgggttacgtggtggaagtgatacgc
ggggctaacagccagcgtattcgcgaactcggccacgacaagctcaaggtgtacggtatg
gggcgcgaacagagtcacgagcactgggtgagcgtgatccgccagttgattcacctgggc
ttcgttacgcaaaatatcgcccagcattccgcgctacagctcaccgatgcttcacgtccg
ctgctgcgcggcgaggtcaccctgcaactcgcagtgccgcgtattgtcgccctgaaaccg
cgcgtcatgcagaaatctttcggcggcaattacgatcgcaaactgttcgccaaactgcgc
aagctgcgtaaagctattgctgatgaagagaatatcccgccgtacgtcgtcttcaacgac
gccacgctgattgagatggcggaacagatgccggtttccgcgagcgaaatgctcagcgtc
aacggggtgggaatgcgcaaactggaacgcttcggtaaagcgtttatggcgttgatccgc
gcgcacgttgatggtgacgacgaagagtag
DBGET
integrated database retrieval system
