Citrobacter amalonaticus FDAARGOS_165: AL524_03760
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Entry
AL524_03760 CDS
T04738
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Pathway
caf03030
DNA replication
caf03410
Base excision repair
caf03420
Nucleotide excision repair
caf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL524_03760
03410 Base excision repair
AL524_03760
03420 Nucleotide excision repair
AL524_03760
03440 Homologous recombination
AL524_03760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caf03032
]
AL524_03760
03400 DNA repair and recombination proteins [BR:
caf03400
]
AL524_03760
Enzymes [BR:
caf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL524_03760
DNA replication proteins [BR:
caf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AL524_03760
DNA repair and recombination proteins [BR:
caf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AL524_03760
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL524_03760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMG52272
LinkDB
All DBs
Position
736422..739208
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKMGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAESDKIAGLTFRGAKTMAGKLEQNK
EVAYLSYKLATIKTDVELELTCEQLEVQQPQADELVGLFKKYEFKRWTADVEAGKWLQAK
GAKPAVKPQETIVIDEAPEEAAVVLSYENYVTILDEATLETWIAKLKKAPVFAFDTETDS
LDNISANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRDRALAMLKPLLEDENARKVGQN
LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRV
ERNGVKIDPAVLHKHSEEITLRLAELEQKAHEIAGEVFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIPPKDYLIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNGARRAGAE
RAAINAPMQGTAADIIKRAMIAVDGWLEMEKPRVRMIMQVHDELVFEVHKDDLDTVAKKI
HQLMENCTRIDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccacttatccttgtagatggctcctcttatctctatcgc
gcataccatgcgtttccgccgctgaccaacagcgcaggcgaaccgacaggcgcgatgtac
ggtgtcctcaatatgctgcgcagcctgatcatgcaatatcagccaacgcatgccgcagtg
gtatttgatgccaagggtaaaaccttccgtgacgaattattcgagcattacaaatcgcat
cgcccgccgatgccggacgatctgcgggcgcagatcgaaccgctgcatgccatggtgaag
gcgatggggctaccgctgctggctgtatctggcgtggaggcggacgatgttattggtacc
ctggcgcgtgaggcagaaaaaatggggcgcccggtgctgatcagtactggcgataaagac
atggcccaactggtcacgccaaatatcacactcatcaatactatgactaacaccattctt
ggtccggatgaggtggtgacaaaatacggcgtgccgccggaactgatcatcgatttcctg
gcgctaatgggcgattcctccgataacattccgggcgtaccgggggtcggggaaaagacc
gcgcaggcattgctacaggggctgggcggcctggatactctttatgctgagtccgataaa
attgccgggttgacgttccgtggtgcgaaaactatggcgggtaaacttgagcaaaacaaa
gaggtggcatacctctcctataaactggcgacgatcaaaacagacgttgagctggaactg
acctgcgaacaactggaagtgcaacaaccccaggctgacgaactggttgggctgtttaaa
aagtatgaattcaagcgctggaccgctgatgtcgaagcgggcaagtggttacaagcaaaa
ggggcaaaaccggcggtaaaaccgcaggaaacgattgtcattgatgaagccccggaagaa
gccgctgtcgtactttcttatgagaattacgtgaccattctcgatgaagcgacgctggaa
acgtggattgcgaagctgaaaaaagcgccagtgtttgccttcgataccgaaaccgacagt
ctggataacatctccgccaacctggtagggctctcattcgctattgagccgggagtggcg
gcttatgtgccagtggcgcatgactatctggatgcgccggatcaaatctcccgcgaccgt
gcgctggcgatgctcaagccgctcctggaagatgaaaacgcgcgtaaggtcgggcaaaat
ctcaagtacgatcgcggcattctggcgaattatggtatcgaactgcgcggcatcgctttt
gataccatgctcgagtcgtacattctgaacagcgttgccggacgtcacgatatggacagt
ttgtccgatcgctggctgaaacataaaaccatcacttttgaagagattgcgggtaaaggg
aagaaccaactaacctttaatcagattgcgctggaagaggcgggacgttacgcggcagaa
gatgccgatgtcaccttacagctgcatctgaaaatgtggccagagctgcagcagcacaaa
gggccgctgaacgtctttgaaaacatcgaaatgccactggtaccggtgttatctcgtgta
gagcgtaacggtgtgaagatcgaccccgcggtgctgcacaagcactccgaggagatcacg
ctccgtctggcggagctggaacagaaagcccatgagattgcaggagaagtatttaacctt
tcttcaaccaagcagttgcagacgatcctattcgaaaaacagggcattaagccgctgaag
aaaaccccaggcggcgcgccgtcaacctctgaagaagtgctggaagaactggcgctggat
tacccgctacctaaagtgattcttgagtatcgcggtctggcgaagctgaaatcgacctac
accgacaaactcccgctgatgattaacccgaaaaccgggcgtgtgcacacctcttatcat
caggccgtgaccgcgacgggccgtttgtcatcgaccgatccgaacctgcaaaacattccg
gtacgtaatgaagaagggcgtcgtatccgccaggcatttatcccgccgaaggattacctg
attgtttctgcggactattcgcagattgaattgcgtattatggcgcacctttcacgcgac
aaagggctgctgacggcgtttgccgaagggaaggacattcaccgtgccaccgccgccgaa
gtgtttggtctgccgctggagaccgtgaccagcgaacagcgtcgcagcgcgaaagcgatc
aactttggtctgatctacggtatgagtgcgttcggtctggcgcgccagttgaacattccg
cgtaaagaagcgcagaaatacatggacctctattttgaacgttatcccggcgtgctggag
tatatggaacgcactcgcgctcaggcgaaagagcagggctacgttgaaacgctggaaggc
cgtcgtctctatctgccggatattaaatccagcaacggcgcgcgtcgagcgggtgcggag
cgtgcggcgattaacgccccgatgcaaggaaccgctgccgatattatcaaacgggcgatg
attgcggtcgatggctggctggaaatggaaaaaccgcgcgtgcgtatgatcatgcaggta
cacgatgaactggtgtttgaagtacacaaagacgacctggacacggtagcgaaaaagatc
catcagttgatggagaactgcacacgcattgatgtaccgctgctggtggaagttggaagt
ggtgaaaactgggatcaggcgcactaa
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