Citrobacter amalonaticus FDAARGOS_165: AL524_05815
Help
Entry
AL524_05815 CDS
T04738
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caf02000
]
AL524_05815
Transporters [BR:
caf02000
]
Other transporters
Pores ion channels [TC:
1
]
AL524_05815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AMG52634
UniProt:
A0A381GFW4
LinkDB
All DBs
Position
complement(1177082..1180408)
Genome browser
AA seq
1108 aa
AA seq
DB search
MRLIIAFLMAWCLSQGAYAATAPDAKQITQELEQAKSAKPAQPDVVEALQSALNALEERK
GSLERAQQYQQVIDNFPKMSASLRAQLTNLRDEPRSVSPGMTTDALNQEILQVSSQLLEK
SRQAQQEQERAREIADSLSQLPQQQTDARRQLNEIERRIGSATGNTPLNQAQNFSMQAES
ARLKALVDELELAQLSANNRQELARMRSELAEKQSQQLDAYLQALRNQLNSQRQREAERA
LESTELLAENSADLPPDIVAQFKVNRELSAALNQQAQRMDLVASQQRQAASQTQQVRQAL
TTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVQRLRYEDQLNKQPQL
RQLHQADGQPLTAEQNRILEAQLRTQRELLNSLLQGGDTLILELTKLKVSNSQLEDALKE
VNEATHRYLFWTSDVRPMSFSWPIDIVQDLRRLISLDTFSQLGQASVMMLTSRDTLLPLF
GALILVGFSIYSRRHFTRFLERSAARVGKVTQDHFWLTLRTVFWSILVASPLPVLWMTLG
YGLREAWPYPLAVAIGDGVTATVPLLWVVMICATFARPNGLFIAHFGWPRERVSRAMRYY
LMSIGLIVPLIMALIMFDNLNDREFSGSLGRLCFMLICGALALVTLSLKKAGIPLYLDKE
GSGDNIVNSMLWNLMIGAPVVAILAAAVGYLATSQALLARLETSVAIWFLLLVIYHVIRR
WMLIQRRRLAFDRAKHRRAEMLAQRARGEEEPAHSTSLEGTIDVDESEVDLDAISAQSLR
LVRSILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILV
FIITTQLVRNLPALLELALLQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWAKL
QWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTIS
DWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPSDVNSEEVTQILLTAAHRCSLV
IDNPAPEVFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFREHGIDMPFPPFQ
MRLESLNGRQTGKTLSSAGRRSRPAGSL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgattatcgcgtttctgatggcctggtgcctcagccagggggcgtacgctgca
accgcccccgacgccaaacaaatcactcaggaactggagcaggcgaaatccgcaaagcct
gctcagcctgatgttgttgaagcccttcagtctgcgttgaacgcgctcgaggaacgtaaa
ggttctctcgaacgcgcacagcaatatcagcaggttatcgataatttcccgaaaatgtcc
gccagcctgcgcgcgcagttaaccaatctgcgcgatgaaccccgcagcgtatcgccgggc
atgacgactgatgcgctgaatcaggaaattctccaggtcagtagccagttgctggaaaaa
agccgtcaggcccagcaggagcaggaacgcgcccgtgagattgccgactcattaagccaa
ctgcctcagcagcaaaccgatgcccgccgacagctcaacgaaattgaacgccgtattggc
agcgccaccggcaacaccccgctcaaccaggcgcaaaatttcagcatgcaggctgaatcc
gctcgcctgaaagcgctggttgatgagctggagctggcgcagttgtcggccaacaaccgt
caggaactggctcgtatgcgctcggaactggcggaaaaacagagccagcaactggatgcg
tatttacaggcactgcgcaatcagctcaacagccagcgccagcgtgaagccgaacgggcg
ctggaaagtaccgagttactggcggagaatagcgctgatttaccgccggatattgtcgcc
cagttcaaagtgaaccgggaactgtcagccgcgctgaatcagcaggcgcagcgcatggat
ctcgtcgcctctcagcaacgtcaggccgccagccagactcagcaggtacgtcaggcgttg
acgacgctgcgtgaacagtcgcaatggttaggctcgtctaacctgttgggtgaagcgtta
cgcgcccaggtggcacgtctgccggaaatgcccaaaccccagcagttggatactgaaatg
gcgcaactgcgcgtccagcgtctgcgctatgaagatcagctcaataagcagcctcagctg
cgccagctccatcaggcggacgggcagccgctcaccgccgaacaaaaccgtattcttgag
gcgcaactgcgcacccaacgtgagctactgaattcgctgttacagggcggcgacacgctg
atccttgaactgaccaagctgaaggtctccaatagccagcttgaagatgcgttgaaagag
gtgaacgaagcgacccaccgctatctgttctggacctcagacgttcgtccaatgtcattc
tcctggccgatagatatcgtgcaggatctgcgtcggctgatctcactcgacaccttcagc
cagttaggtcaggccagcgtgatgatgctgaccagcagagataccctgctgccgctgttt
ggcgcgttgattctggtcgggttcagcatttactcgcgtcgccactttacccgttttctg
gagcgttctgccgcccgagtgggcaaggtgacgcaggatcacttctggctgacgctgcgt
accgtgttctggtcgatactggtggcctcgccgctgccagtactgtggatgacgctggga
tacggactacgcgaggcctggccttatccactggctgtcgcgataggcgatggcgtcacg
gcgacggtgccgctgctgtgggtcgtgatgatttgcgcgacatttgcccggcccaatggc
ctgtttatcgcccactttggctggccgcgcgaacgcgtgtcacgtgcgatgcgttattat
ctgatgagtatcgggcttatcgtgccgctgattatggcgctcatcatgtttgataacctc
aacgatcgggagttttctggctcgctcggtcgcctgtgctttatgctgatttgcggcgcg
ctggcactggtcaccctgagcctgaaaaaagccgggatcccgctctatctcgataaagaa
ggcagcggcgacaatatcgtgaacagcatgctgtggaacctgatgataggcgcgccggtg
gtggcgatactggctgccgccgtgggctatctggcgacgtcacaggcgctgctggcgcga
ctggaaacctctgtcgccatctggttcctgctgttggtgatttatcacgtcattcgccgc
tggatgctgattcagcgtcgcagactggcctttgaccgtgccaagcaccgccgtgcggaa
atgctggcccagcgcgcccgtggcgaagaagagccggctcattcaaccagtctggaaggg
accatcgacgttgatgagagcgaagtcgatcttgatgctatcagcgcccagtcgctccgt
ctggtgcgctccatcctgatgctgatcgccctgctgtcggtcattgtgctgtggtcggaa
attcactccgcattcggcttcctcgaaaacatctcgctgtgggacgtcacctcgacggtg
caaggggttgaaagtttagaacccattacgctgggcgcggtgctgatcgcgattctggtg
tttatcatcaccacccaactggtgcgtaatctgcctgcgcttctcgagctggcgttgcta
caacacctcgatctcacgccgggtaccggctatgccattaccaccatcaccaagtacctg
ctgatgttaattggcggtctggtgggcttctcgatgatcgggattgagtgggcgaaactg
caatggctggtggcggcactcggcgtcggtctgggctttggtttgcaggaaattttcgcc
aactttatctccggcctgatcatcctgtttgaaaagccgattcgtattggtgacaccgtg
accattcgcgatctgacaggcagcgtaacgaagatcaatacccgcgcgacgaccatcagc
gactgggaccgcaaagagatcatcgtgccgaacaaagcgtttatcaccgagcagttcatc
aactggtcgctgtctgattccgtgacacgcgtggtgctgaccattccggccccatccgat
gtgaacagcgaagaagtgacgcagatcctgctgaccgccgcacaccgctgctcgttagtc
atcgataacccggcgccagaagtcttccttgtggacttacaacaggggattcagatcttc
gaactgcgtatctatgccgccgagatgggtcatcgcatgccactgcgccatgaaatccac
cagttgattctggcaggcttccgcgagcacggtatcgatatgccgttcccaccattccag
atgcgtctggaaagtttgaatggccgacaaacaggaaaaacgctcagttctgccggcaga
agaagtcgtccggcggggagtttgtaa
DBGET
integrated database retrieval system
