Citrobacter amalonaticus FDAARGOS_165: AL524_07760
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Entry
AL524_07760 CDS
T04738
Name
(GenBank) HTH domain-containing protein
KO
K02430
DeoR family transcriptional regulator, L-fucose operon activator
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caf03000
]
AL524_07760
Transcription factors [BR:
caf03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
AL524_07760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_Mga
DUF1670
HTH_Crp_2
z-alpha
HTH_20
TrmB
MarR
HTH_PafC
HTH_24
Fe_dep_repress
Sigma70_r4
PCI
HTH_5
Mga
Rrf2
DDRGK
Put_DNA-bind_N
HTH_69
FeoC
Motif
Other DBs
NCBI-ProteinID:
AMG52988
LinkDB
All DBs
Position
complement(1602242..1602952)
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AA seq
236 aa
AA seq
DB search
MKAARQQTIVDLLSQHKSLTTEALAVQLNVSKETIRRDLSELQEQGKVLRNHGRVKRIAR
ENPDSGDPFHIRLKSHYAHKADIARKALSWIEEGMVIALDASSTCWYLARQLPDINIQVF
TNSQPICQELGKRQQLQLISSGGRLERKHGCYVNPALISQLKFLDIDLFIFSCEGIDRHG
ALWDSSTFNADFKSVLLKRASQSLLLIDKSKFNRSGEARLGHLDDVTHIVSDTPQS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggcacgccagcagacgattgtggatctgctcagtcagcataaaagcctgacc
accgaagcactggccgttcagctcaacgtcagtaaagagacgatccgccgcgatctcagt
gaactacaggaacaagggaaggttctgcgcaaccacgggcgcgttaaaagaatcgcccgg
gaaaacccggacagtggcgatcccttccatatacggctgaagagccattacgcgcacaaa
gccgatattgcccgaaaggcgctgagctggattgaagaagggatggtgattgcgctggat
gccagctccacctgctggtatctggcgcggcaactaccggatatcaatatacaggttttc
accaacagccagccgatttgtcaggagctcggcaaacgccaacaacttcagctcatcagt
tctggtggccggctggagcgcaaacacggctgctacgtcaaccccgcactcatttcacaa
ctcaaatttcttgatatcgatctgttcattttttcctgcgaagggatcgaccgtcacggc
gcactgtgggattccagcaccttcaacgcggatttcaaatcagtcctgctgaaacgcgcg
tcacagtcgttattgctgatcgacaaaagcaaattcaatcgttccggagaagcccgactc
ggtcatctggatgacgtaacgcatattgtgtcggacacgccgcagtcataa
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