Citrobacter amalonaticus FDAARGOS_165: AL524_14275
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Entry
AL524_14275 CDS
T04738
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Pathway
caf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AL524_14275
Enzymes [BR:
caf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AL524_14275
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_8
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AMG56031
LinkDB
All DBs
Position
complement(2932138..2934129)
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AA seq
663 aa
AA seq
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MKDSLESTTLYSFLGTHAPYWRLSEDSNTLHLSVTEATDRVESVELAPEQAERIREMTVI
TSGLMMTLPFEDNDVPVHLVGRKINKHEWAGSASAWHDTPSVARDLVKGLSFAEQVVTEA
NSAIVILDSRGNIQRFNRLCEEYTGLKEQEVIGQSVFKLFMSRREAAASRRNISGFFRNG
NSYEVERWVKTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRTQERLRVLANTD
TITGLPNRNAIHELINEAIEQAGDSQVGIVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAL
LSCLEENQLLARLGGDEFIVLASQTSQSSLEAVASRILTRLRQPFRIGLIEVYTGCSVGI
AMAPQHGEDSSNLIRNADTAMYTAKEGGRGQFCVFSPEMNERVFEYLWLDTNLRKALEND
QLLIHYQPKVTWRGEVRGLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVI
RQVAKWRDKGINLRVAVNISARQLADQTIFTDLKRVLRELNFEYCPIDVELTERCLIENE
ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLTRFPIDAIKLDQIFVRDIHKKSVSQSMV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPAVAFERWYKRYLNK
KKR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacagtctggagtccacaacgttgtatagctttttgggtactcacgcgccttac
tggcgtttgtcagaagattccaacaccctgcatttgtccgtcaccgaagcgaccgaccga
gtggagagcgttgagcttgcgcccgagcaagccgaacggatccgtgaaatgaccgtcatc
acctccggtctcatgatgacactcccctttgaagacaacgatgtcccggtgcacctggtg
ggccgcaaaattaacaaacatgaatgggctggcagtgcgtcggcctggcacgacacccct
tctgttgcgcgtgacctggtcaaggggctctcgtttgctgaacaagtagtgacagaagcc
aactcggcgattgtgatcctcgacagtcggggtaacattcagcgcttcaatcgcctgtgt
gaagagtacaccgggttgaaagagcaggaagtgattggacagagcgtctttaaactcttc
atgagccgccgggaagccgccgcttcgcgtcgcaacatcagcggcttctttcgcaacggc
aactcgtatgaagtggagcgctgggtaaagacccgcaagggacagcgtctgttcctgttc
cgcaataaatttgtgcacagcggcagcggtaaaaacgaaatctacttgatctgttccggt
acggacatcacggaagaacgacgtacgcaggaacggttgcgcgtgctggcgaataccgac
acgattaccgggttgccaaaccgcaacgctatccatgaactgatcaacgaggccatcgaa
caggctggcgacagtcaggtgggtattgtttatctcgacctggataacttcaagaaggtg
aacgatgcctatggtcatatgtttggcgatcagcttttgcaggcggtatcgttagccctc
ctgagctgtctggaagagaatcaactgctggcacgtctcggcggtgacgagtttattgtg
ctggccagccagacgtctcagagctcgcttgaggcggtcgcctcgcggatcctcacccga
ttgcgccagccctttcgtatcggcctcatagaagtctataccggctgttctgttggtatc
gcgatggcgcctcagcacggcgaggacagcagcaacctgatccgcaatgcggataccgca
atgtacaccgccaaagaaggcggacgtggccagttctgcgttttctcgccagaaatgaac
gagcgggtattcgaatacctgtggctggacaccaacctgcgcaaagcgctggaaaacgat
cagttactgattcactatcagccgaaagtgacctggcgaggtgaagtccgcggccttgag
gcgctggtgcgttggcagtcccctgaacgtgggcttatccctccgctggagttcatctca
tacgctgaagagtccgggctgattgtgccgctcggccgctgggtgatcctcgatgttata
cgccaggtcgcgaaatggcgggataaaggcataaacctgcgcgtggcggttaacatctct
gcccggcaactggctgatcaaacgattttcaccgatctgaagcgcgtattgcgcgagctc
aatttcgaatattgccctattgatgtcgagctgacggagcgttgcctgattgagaacgaa
gaacttgcgctatccgtcattcagcagtttagccagcttggcgctcaggtgcacctggat
gactttggtaccggttattcctcgctttcgcaactgacgcgtttcccaattgatgccatt
aagctggatcagatttttgtccgcgacattcacaaaaagtcggtgtcacaatcgatggtg
cgcgcgatcgtcgccgtggcacaggctttgaatctccaggtgattgccgaaggtgtggag
agcgccaaagaggatgcttttctgacgaaaaacggcgtcaatgagcgacaaggtttttta
tttgccaaaccgatgcctgccgttgcgtttgagcgctggtacaaacgttacctcaacaag
aaaaagcgctaa
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