Citrobacter amalonaticus FDAARGOS_165: AL524_17760
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Entry
AL524_17760 CDS
T04738
Name
(GenBank) exonuclease
KO
K10906
exodeoxyribonuclease VIII [EC:3.1.11.-]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caf03400
]
AL524_17760
DNA repair and recombination proteins [BR:
caf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AL524_17760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rv2179c-like
Exonuc_VIII
Bflower
Motif
Other DBs
NCBI-ProteinID:
AMG54794
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Position
3663828..3666119
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AA seq
763 aa
AA seq
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MNTYAYIIKAKAKATDSKSLFCWFSAKSDSRAEREILNLLEDSGIEVGRGADYQLPIRTN
WFVVDDLPDEGTLDDTWCDRYELSEDGLAWKKIVVAETPAEPAEPAEPAEPAEPAEPAEP
AEPAEPAEPESTVLETGEQPANDAAPEVNENIQHEQDLTEGKDSHSEYPKLTAVPTMSFR
HRVLAQDIGGGEYMYHVDEEQKKEIIALEMDQDNSYIQNLLLAAENVEKFKKANEVDIWK
AVNSVKTVFPVDKKTPELASVIQFLNAWFNTEHIDRGLLTKEWTNGNRLSCIQRTSGGAN
AGGGIKTDRNPDYIHTLDTLDYEIAAATLPMDFDIYNIPLSIHRRAKEIITKKESPWKEW
SSALRATPGILDYSRAAIFALIRGAGENVHNFPNSLRRYISANLAESNHEKPTADTLATS
RQINSASVTLDAVHDAIKGNNETTIPDGVGEEYAFVGNKLVTEARSRAEQPNIENHGNGV
FSIDSLVNTPPAQQLSVVDQVRQHSAEEKIKSDNNEEATSDVQMEEVVHDEAQAGTEVSQ
GETTTMPDESADASGEQTDAVNNESVHQITEQKSDKLYSHLMVDMETMGFGPDAAIVSIG
GVFFDPSSGNTGAEFYQVVRLESSMSFGMKPDASTIEWWLKQSPEARSAILVDDAMGLLE
TLELLADFIAENAANGSRTVQIWGNGCSFDNVILRRAFALTDTPFPVPYWNDRDVRTMVE
LGKSVGINPRFDISFEGDMHNALSDARHQVKYVSAIWQRLTAN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatatgcgtatatcatcaaagccaaagccaaagcgactgactcaaaaagcctt
ttttgttggttctctgcaaaatcagactcgcgtgctgaacgcgaaattctcaaccttctg
gaagattccgggattgaagttggccgtggtgctgactaccagctacctattcgtactaac
tggtttgttgttgacgatctgcctgatgaaggaacgctggatgacacgtggtgtgatcgc
tacgagctcagcgaggatggtttagcctggaaaaaaatagtggtagccgaaacgccagca
gagccagcagagccagcagagccagcagagccagcagagccagcagagccagcagagcca
gcagagccagcagagccagcagagccagaatctaccgtattggaaacaggcgaacaacca
gcaaatgatgcagcccccgaggttaatgaaaatattcaacacgagcaggatcttactgaa
gggaaagactctcactccgaataccccaaattaacagctgtacccactatgtcattccga
catcgcgtgctggcgcaggacatcggcggcggtgagtatatgtatcacgtcgacgaagag
cagaaaaaagaaattatcgcactggaaatggatcaggataattcatatatccagaacctg
ctgctcgcggcagagaatgttgaaaagttcaagaaagccaatgaagttgatatctggaag
gcagtgaattccgtaaaaacagtattccctgtcgataaaaaaacgccagaactggcaagc
gttatccagttccttaatgcctggtttaatacggaacatattgatcgcgggcttctaacg
aaggagtggactaacggtaatcgtctgtcctgcatccagagaacttccggcggggctaac
gctgggggtggaattaaaactgaccgcaaccctgactacattcacaccctcgatacgctg
gattatgaaattgccgcggccacattgccgatggattttgatatttacaatataccgtta
tccatccatcgacgagctaaagaaatcatcactaaaaaagagagcccatggaaagaatgg
tcctctgctcttcgcgccactccaggtattcttgactattcaagggctgcaatctttgca
ctcattcgcggtgctggcgaaaacgttcataacttcccgaatagtttgcgccgatacatt
agcgcgaacctggcagaaagcaatcacgaaaaaccgactgctgatactcttgcgacttcc
cgccagattaattctgcatcggtaaccctcgacgcagttcacgatgccatcaaaggcaat
aatgaaaccacgatccctgatggggtgggcgaagaatatgcctttgttggtaataaactc
gtcactgaagcccggtcccgcgctgagcaaccgaacatcgaaaaccacggcaatggtgtc
ttttccatagacagcctggttaacacgccaccagcgcaacaactatctgttgtcgaccag
gttcgccagcactcagctgaagaaaaaataaaatcagataacaacgaggaagccaccagt
gatgtgcagatggaagaggttgtccacgatgaagcccaggctggtactgaagtgtctcag
ggcgaaacaacaactatgccagatgaaagcgctgatgcttctggtgaacaaacagatgca
gtaaataatgaatccgttcatcaaattactgaacaaaagtctgacaaactttattcccac
ttaatggtggatatggaaactatgggcttcggccctgatgccgcaatagtttctatcggt
ggcgtatttttcgatccttcttctggcaacactggtgccgagttttaccaggtcgtcaga
cttgaatcatctatgtcgtttggcatgaaacccgatgcgtcgacaatcgagtggtggtta
aaacaatccccggaagctcgttctgcaattcttgttgatgatgcaatgggtttgcttgaa
accctcgagcttctggctgacttcatagctgaaaacgctgctaacggtagccgcacagtt
cagatatggggtaacggatgctcctttgataacgtcattctccgccgtgcgtttgcatta
acagatacccccttccctgttccgtactggaatgacagggatgtaaggaccatggtcgaa
ttgggtaaatctgtgggtatcaatccacgctttgacatctcgtttgaaggtgacatgcac
aacgcgctttctgatgcccgacatcaggtcaaatacgtgtcagcaatctggcagcgtctg
actgcaaactga
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