Citrobacter amalonaticus FDAARGOS_165: AL524_21535
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Entry
AL524_21535 CDS
T04738
Symbol
ldcC
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Pathway
caf00310
Lysine degradation
caf01100
Metabolic pathways
caf01110
Biosynthesis of secondary metabolites
caf01120
Microbial metabolism in diverse environments
Module
caf_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
AL524_21535 (ldcC)
Enzymes [BR:
caf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
AL524_21535 (ldcC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AMG55453
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All DBs
Position
complement(4479161..4481299)
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AA seq
712 aa
AA seq
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MNIIAIMGPHGVFYKDEPINELERALQSQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSEINQLNEYLPLYAFINTHSTMDVSVHDMRMALWFFEYALGQAEDIATRIRQY
TNEYLDNITPPFTRALYTYVKEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPTGSTLLI
DRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPKREFTRESIANKVATTAQAQWPVH
AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIF
ETQSTHKMLAALSQASLIHIKGDYDEETFNEAFMMHTSTSPSYPIVASIETAAAMLRGNS
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPEEVDEAACWPVAPGEDWHGFTDAD
DDHMFLDPVKVTILTPGMNEQGEMSNEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRSYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHQLIRQH
DLSGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETVPLDQLVGRVSANMILPYPPGVPLLM
PGEMLTEQSRAVLDFLLMLCSVGQRYPGFETDIHGAKQDDDGVYLVRVLKTA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatcgccattatggggccgcacggggttttttataaagacgagcccattaac
gagcttgagcgtgcgctgcaatcacagggatttcagattatctggccgcaaaacagcgtc
gacctgctgaaatttatcgaacacaacccgcgcatttgtggggtgatttttgactgggat
gagtacagtctcgatttgtgcagtgagattaaccagctcaatgagtatttaccgctgtat
gcgtttatcaacacgcattcgacgatggatgtcagcgttcacgacatgcgcatggcgcta
tggtttttcgagtatgcgctcgggcaggcggaagatatcgcgacgcgcattcgccagtac
accaacgagtaccttgacaatatcacgccgccttttaccagagcgctgtacacctatgtg
aaagaggggaaatacaccttctgcacgccgggtcacatggccggaacggcctatcaaaaa
agtccggttggctgcctgttctatgactttttcggtggcaataccctgaaagcggatgtg
tcgatatcagtcactgaactgggttcgttactcgatcacaccgggccacatctggaggct
gaagagtatatcgcccgaacgttcggcgcagagcagagttatatggtgactaacggcacc
tccacctcaaacaaaattgtggggatgtatgccgcgccaaccggcagtacgctgttgatt
gaccgtaactgccataagtcgctcgcgcatttgttgatgatgagcgacgtcgtgccgatc
tggctgaaaccaacgcgtaatgcgctcggtattctgggcggcattccgaagcgtgagttc
acgcgcgagagtattgcgaacaaagttgccaccacggcgcaggcgcagtggccagttcat
gccgtgatcactaactcaacctatgacggcctgctgtataacactaactggatcaaacag
acgctggatgtcccctctatccacttcgattctgcctgggtgccctatacccactttcat
cccatttatcaggggaaaagcgggatgagcggtgaacgggtgcctggcaaggtgattttc
gaaacgcaatccacccacaaaatgttggcggcgctatcgcaggcgtcgctgattcatatt
aaaggggattatgacgaagagaccttcaacgaagcgtttatgatgcacacctcgacctcg
ccgagttatccgattgtcgcctccatcgagacggcggcagcgatgctgcggggaaattcc
ggtaagcgattaatcaatcgctctgtggagcgcgcgttacattttcgcaaagaagtgcag
cggctacgtgaagagtctgacggttggttctttgatatctggcagccggaagaggttgat
gaagccgcgtgctggccggtggcacccggtgaagactggcacggatttaccgatgccgac
gatgaccatatgttcctcgatccggtaaaagtcacgatcctgacgcccggtatgaacgag
caaggggagatgagtaacgaggggatccccgccgcgctggtggcgaaattccttgatgag
cgcggcgtggtggtggagaaaaccgggccgtacaatctgctgtttctcttcagtattggt
atcgataaaacccgggcaatggggctgttgcgtggactgaccgaatttaaacgctcttac
gatctcaatttgcgcgtgaagaatatgctgccggatctgtatgcagaagatcctgatttt
tatcgcaacatgcgtattcaggatctggcgcaagggatccaccagctcatccgccaacac
gatctttccggtctgatgctgcgtgcgtttgatacattgccggaaatgatcatgacgccg
catcaggcctggcagcgacagatcaaaggcgaagtcgaaacggtccccctcgatcaactg
gtgggacgtgtgtcggcgaatatgatcctgccataccctcccggcgtgccgctgctgatg
ccgggagaaatgctcaccgagcagagtcgcgccgtactcgattttctgctgatgctctgt
tctgttggtcagcgttatccgggctttgaaacggatattcacggggcgaaacaggatgac
gacggcgtatacctcgtacgagtcttaaaaacggcatga
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