Citrobacter amalonaticus FDAARGOS_165: AL524_22160
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Entry
AL524_22160 CDS
T04738
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caf03021
]
AL524_22160
Transcription machinery [BR:
caf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AL524_22160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
GT_PLOD
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AMG55574
UniProt:
A0AAX2BHT9
LinkDB
All DBs
Position
4627717..4630623
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLQIDEVKEENGLLAYIGTRLDTEEAGVTLREVLLDSKLAFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAFNPFETEQLVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSEEAPSREYVAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNEELNMLGELIGEQDIEPLLQTANSDRDGAQNARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKNAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFGEEDSGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDTVYSNLINYLAAPEET
DGFEDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLAESIEEQDDDTSLIAFAM
NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVEKSAR
ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELAAIESNRQQVLESLNQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaactgggacttgga
accgttgtcgccatggatgcgcgcaccgtcactttgcttttcccctccaccggtgaaaac
cgtctgtatgcgcgcagtgactcccccgtgacccgcgtgatgttcaaccctggcgatacc
attaccagccatgaaggctggcagctgcaaatcgatgaagtaaaagaagaaaatggtttg
cttgcctacattggtacccgtcttgataccgaagaagccggcgtcacgctgcgtgaagtc
ctgctcgacagcaaactggcgttcagcaaaccgcaggatcgcctgtttgctggtcagatt
gaccgcatggatcggtttgcgctgcgctaccgcgcacgtaaatttcaaagtgaacagtac
cgcatgccatggagcggtctgcgcggccagcgcaccagcctgatccctcatcagctcaac
atcgcccacgatgtgggtcgccgtcatgcgccgcgcgtactgctggcagatgaagtgggt
ctgggcaaaaccattgaagccgggatgatcctgcatcaacaactgctttctggcgcggca
gaacgcgtgctgattattgtgccagaaaccttgcagcatcagtggctggtcgaaatgctg
cgccgtttcaatctgcgtttcgccctgtttgacgacgaacgctacgccgaagcgcagcac
gatgcgtttaacccgttcgaaaccgaacaactggtgatctgttctctggacttcgcccgc
cgtaacaagcagcgtctggaacacctgtgcgatgccgagtgggatctgctggttgtcgat
gaagcccaccacctcgtctggagcgaagaggcgccgagccgtgaatatgtggcgatagaa
caactggcggaacgcgtgccaggcgtactgttgctgaccgccaccccggaacaactgggt
atggaaagccactttgcgcgtctgcgcctgctggatcccaaccgtttccacgatttcgca
cagtttgttgaagagcagaaaaattatcgcccggttgccgacgccgtcgctatgctgctg
gccggtaacaagctcagcaatgaagagctcaacatgctgggcgaactgattggcgagcag
gatattgaaccgctgctgcaaacggcaaacagcgaccgcgacggtgcgcagaacgcacgt
caggagctggtttccatgctgatggaccgccacggcaccagccgcgtgctgttccgtaac
acccgtaacggcgtaaaaggcttcccgaaacgcgaactgcacaccattaagctgccgctg
ccgacgcagtatcagactgccattaaagtgtccggcatcatgggtgcccgcaaaaacgcc
gaagacagagcgcgcgatatgctctatccggaacagatttatcaggaatttgaaggggat
accggcacctggtggaacttcgacccacgcgttgagtggctgatgggctacctgaccagc
catcgctcacagaaagtgctggtgatctgtgcgaaggcggcaaccgctctgcagctggag
caagtgctgcgcgagcgcgaaggtatccgcgcggcggtcttccacgaagggatgtcgatt
atcgaacgtgaccgcgccgccgcctggttcggcgaagaggacagcggtgcacaggtgctg
ctgtgttcagaaattggctcggaaggtcgtaacttccagtttgccagcaacctggtgatg
ttcgacctgccatttaacccggacctgctggaacaacgtattggtcgtctcgaccgcatc
ggccaggcgcacgatatccaaatccatgtcccgtatttagagaaaaccgcccagtcggtg
ctggttcgctggtatcacgaaggtctggatgcgttcgaacatacctgcccgaccggtcgt
gctatttatgatacggtttacagcaacctgattaactacctggcggcgcccgaagagacc
gatggctttgaggatctgatcaaaagctgtcgcgaacaacacgaagcgctgaaagcgcag
ctggaacagggtcgcgaccgtctgctggagatccactccaacggcggcgaaaaagcgcag
caactggccgaaagtattgaagagcaggacgacgacaccagccttatcgcctttgccatg
aacctgtttgatatcgtggggattaaccaggacgatcgtggtgaaaacctgattgtactg
accccatccgatcacatgctggtgccggacttcccggggctgccagaagacggttgtacc
attacctttgaacgtgacgtggcgctgtcgcgtgaagacgcgcagtttattacctgggaa
catccgctgatccgtaacgggctggatctgatcctctctggtgataccggtagcagtacc
atttccttgttgaagaataaggcgctgccggtcggtacgctgcttctggagctggtatac
gttgtggaagcccaggcaccgaagcagttgcagcttaaccgcttcctgccgccgacgccg
gtgcgcatgctgctggataaaaacggcaacaacctcgcggcgcaggtggagtttgaaacc
ttcaaccgccagttgagtgccgtaaaccgccacaccggcagcaaactggttaatgcggtg
cagcaggatgttcatgcgattctgcaactgggtgaagcgcaggttgagaagtccgcccgc
gccctgattgacgcggcgcgtaatgaagcggatgaaaaactgtctgcagaactgtcgcgc
ctggaagcgctgcgcgccgtcaacccgaacattcgtgatgatgaactcgcggccattgaa
agcaaccgtcaacaggtgctggaaagcctgaatcaggcaggatggcgtctggatgcgctt
cgtcttatcgtcgtcacgcatcagtaa
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