KEGG   Citrobacter amalonaticus FDAARGOS_165: AL524_22830
Entry
AL524_22830       CDS       T04738                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
caf  Citrobacter amalonaticus FDAARGOS_165
Pathway
caf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:caf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AL524_22830 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:caf02044]
    AL524_22830 (icmF)
Secretion system [BR:caf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL524_22830 (icmF)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical AAA_16 AAA_22 AAA_33
Other DBs
NCBI-ProteinID: AMG55700
LinkDB
Position
complement(4775000..4778461)
AA seq 1153 aa
MPKFKVSALWLLVLAWIFLLVWIWWKGPSWSFYDEHWLKPLTNRWLATAAWGIVALGWLT
VRVMKRLQQLEKQQKLQREEAQDPLSVELNIQQRYLDRWLLRLQRHLDNRRYLWQLPWYM
VIGPAGSGKTTLLREGFPSDIIYTPEAVRGAEQRVYLTPHVGKQAVIFDIDGALCEQPDA
DILHRRLWEHLLGWLVEKRARQPLNGIILTLDLPDLLTADKRRREHLLQTLRSRLQDIRQ
YLHCQLPVYVVLTRLDLLYGFAALFQSLNKKDRDTILGVTFTLSAHESEDWRTELNAFWQ
DWCERMNQSMPDLMLAQSHMRSSLFSFIRQMQGSRESLVTLLDGLLDGENMDVMLRGVYL
TSSLQRGQMDDIFTQSAARQYRLGSNPLSAWPLVDTVPYFTRNLFPQVLLSEPNLAGESR
AWLVSSRRRLTVFSAAGGALALLLIIGWHHYYDVNYASGIQVLKQAQAFMAIRPPQGMDD
YGDLQLPLLNPVRDATLAYGDWDDRSRLADMGLYQGRRVGPYVEQTYLQLLEQRYLPALF
NGLVKEMDAAPPESEEKLAVLRVMRMLEDKSGRNNDVVKQYMAKRWSDKFHGQRDTQVQL
MSHLDYALKHTDWHAERAAGDGDAIGRWAPYDKPVVSAQKELSKLPVYQRVYQSLKTRAL
GVLPADLNLRDQVGPTFEQVFVSSDDNKLVVPQFLTRYGLQSYFVKQRDELVELTAMDSW
VLNIIHSVKYSDADRAEIQRQLTEQYISDYTATWRSGMDNLNVRDYESIAQLTAALEQII
SGDQPLQRALTALRDNTQPTVLSEKLSDKERAEALGEPDYRLLTRLGHEFAPENSTLAVQ
NNKENTLQAVYQQLTELHRYLLAIQNAPVPGKSALKAVQLRLDQNSSDPIFATRQMAKTL
PAPLNRWVGKLADQAWHVVMVEAVHYMEIDWRDNVVKPFNEQLANSYPFNPRSSQDVSLD
AFERFFKPDGVLDTFWQQNLKLFIENDLSRDGGDGVIIREDVIRQLDTAQKIRDIFFSKQ
NGLGTQFAVETVSLSGNKRRSVLNLDGQLVDYSQGRNYTAHLVWPNNMREGNESKLTLVG
TSGGAPRSISFNGPWAQFRLFGAGQLTSVEEGTFSVRFNVDGGAMVYRIHADTEDNPFSG
GLFSQFRLPDTLY
NT seq 3462 nt   +upstreamnt  +downstreamnt
atgccaaaatttaaggtctccgcgttatggctattggtgctggcatggatctttctgctg
gtatggatctggtggaaaggcccgtcatggtcattctatgacgaacattggctcaaaccg
ctgacaaaccgctggctggcgacagcggcgtgggggattgtcgccctggggtggctgact
gtccgggtgatgaagcgtctgcagcagcttgagaaacagcaaaagttgcagcgcgaggaa
gcgcaggacccgctcagtgtggagttgaatattcaacagcgctacctcgacaggtggctg
ctgcgtttacagcgtcatctcgacaaccgccgttacctgtggcaattgccgtggtatatg
gttatcggtcctgccgggagcggcaaaaccaccctgttacgggaaggtttcccatccgat
atcatttatacaccggaagcggtacgcggtgcagagcaacgcgtatatctgacgccacat
gttggcaaacaggcggtgatttttgatattgacggcgcactctgtgaacaacctgatgcg
gatattctgcatcgccgcttatgggaacatctactgggatggctggtggaaaaacgtgcc
cgccaaccgctgaacgggatcattctcaccctcgatttacccgacctgttgacggccgac
aaacgccgccgcgaacatctgttgcagacgctgcgtagccgtttgcaggatatacgtcag
tatcttcactgccagttaccggtttacgtggtgctgacccggctggacttattgtacggt
tttgcagccctgtttcagtcgctgaacaaaaaagatcgcgataccatcctcggggttacg
tttactctcagcgcccatgaaagtgaagactggcgtaccgaactgaacgctttctggcag
gactggtgcgaacggatgaaccagtccatgcccgatctgatgttggcgcagagccatatg
cgcagttcattgttcagttttattcgccagatgcagggaagcagggagtctctggtgacc
ctgcttgatggtcttctggacggtgaaaatatggacgtgatgctgcgtggcgtgtatctg
acgtcatcactgcaacgcggtcagatggatgacatctttacacagtctgccgcccggcaa
taccggctcggcagtaatccgctaagtgcctggccactggtggataccgtaccttacttt
acccgcaatctgtttccccaggtacttctgtcggagccgaacctggctggcgaaagccgc
gcctggctggtaagcagccgtagacgtcttaccgtcttttctgccgcgggtggagcgttg
gcgctattgctcatcatcggctggcaccattattacgatgttaactacgcctccggtatc
caggtactgaaacaagctcaggcctttatggcgatcaggccaccccaggggatggatgac
tacggtgatctacaattgccattactcaatccagtacgcgatgcgacgttggcctacggc
gactgggacgatcgcagtcgactggccgatatggggttgtaccagggaaggcgtgtcggg
ccgtatgtggagcaaacctatctgcaactactggagcagcgttatctgcccgccttgttc
aacggtctggtgaaagaaatggatgccgccccaccggagagcgaagaaaaactcgccgtg
ctgcgagtgatgagaatgctggaggacaaaagcggacgtaataatgacgtagtgaagcaa
tacatggcgaagcgctggagtgataagttccacggccagcgcgatacccaagtgcaactg
atgtctcatctcgactatgcgctgaaacataccgactggcatgctgaacgtgctgcgggt
gatggggacgcgatcggtcgttgggcaccgtatgacaaaccggtggtgtcagcacagaaa
gagttaagcaaactgcccgtttaccagcgggtctaccagagccttaaaacccgggcgttg
ggagtactgcccgccgatttgaacctgcgcgatcaggttggcccaacattcgaacaggta
tttgtttcctcagatgacaataagctggttgtcccgcagtttcttacccgctatgggctc
cagagttattttgtgaagcagcgtgatgaactggtggaactgacggcaatggattcctgg
gtactgaatattattcacagtgttaaatacagtgacgcagaccgtgctgaaatccagcgc
cagttaaccgaacagtatattagtgactacaccgccacctggcggtcagggatggataac
cttaacgtacgcgattatgaatccattgcgcagttaaccgccgcgctggagcagattatc
agcggcgaccagcctctacaacgagcgttgacggcgttgcgggataacacacagccgacc
gttctttccgaaaagctatctgataaagaacgcgcagaagcattgggagagccggattat
cgtctgctgacccgtctcggtcatgagtttgcgccggaaaacagcacgctggcggttcag
aataataaagaaaataccctgcaagcggtctatcagcagttaacggaattgcaccgctat
ctgctggctatccagaacgcaccggtacccggtaaatcggcactcaaagccgttcagtta
cgccttgaccagaacagcagcgaccctatttttgcgacccggcagatggcgaaaactctg
cctgcgccgcttaaccgctgggtgggaaaactggcagatcaggcctggcatgtggtgatg
gtagaagcggttcactatatggaaattgactggcgcgacaacgtggtaaaaccgtttaac
gaacaactggcaaatagttatccatttaatcctcgttcttcgcaggatgtgtctctggat
gcatttgagcgcttctttaaaccggatggcgtgctggatactttctggcagcaaaacctg
aaactgttcattgaaaatgacctgagccgtgacgggggcgacggtgtcattatccgtgag
gatgtcatccggcaactggataccgcacagaaaatccgcgacatcttcttcagtaaacag
aatggcctgggaacgcagtttgcggtggagaccgtttcgctttccggcaacaaacgccgt
agcgtgttgaacctcgacggtcagttagtggactacagccagggtcgtaactacaccgcg
catctggtctggccgaacaacatgcgcgaaggcaatgaaagcaagctgacgctggtgggt
accagcggtggcgcaccgcgcagtatcagtttcaacgggccgtgggcgcagttccgcctg
ttcggagccggacagctaaccagcgtggaagagggaacattcagcgtgcgctttaacgtt
gacggtggcgcgatggtctaccggatacacgctgacactgaagacaacccattcagcggc
gggctgttcagccagttccggctgccggatacgctttactga

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