KEGG   Citrobacter amalonaticus FDAARGOS_165: AL524_22885
Entry
AL524_22885       CDS       T04738                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
caf  Citrobacter amalonaticus FDAARGOS_165
Brite
KEGG Orthology (KO) [BR:caf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:caf02044]
    AL524_22885 (tssC)
Secretion system [BR:caf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL524_22885 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: AMG56118
LinkDB
Position
complement(4790675..4792159)
AA seq 494 aa
MSDITLPEVSVSTAPAAASGLLDEIMAQTRFKPESESYDIARQGVTAFITALLQGDDEAE
SVDILAVNGMIADIDARMGRQMDLILHAPEFQELESFLRSLKLLVDHADPRENIKIHIMH
ATKEELLDDFEFAPEITQSGFYRHVYSSGFGQFGGEPVAAVIGNYTFDNTTADMKLLKYI
SAVSAMAHSPFLSSVSPEFFGLDSFTELPGIKDVAAIFEGPAYTKWRSLRESEDARNLGL
TAPRFLLRHPYAPDENPVKSFNYHEDVSKNHEHYLWGNTAFLLAANMAESFMSTRWCPNI
VGPQSGGAVKDLPVHLYEAMGQLQAKVPTEILITDRREYELAEQGFITLTMRKGSDNAAF
FSANSVQKPKVFPNTPEGKEAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERGD
LERELNTWIRQYVADQENPPSEVRSRKPLRQAKIEVSDVEGEPGWYQVALSVRPHFKYMG
ASFELSLVGRLDRE
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgtcagacattacattaccggaagtatccgtttccactgcgccggctgccgcgtccggt
ctcctggatgaaatcatggcgcagacccggttcaaaccggaatcagaaagctacgatatt
gcccgtcagggggtaaccgcttttatcactgcgctgttgcagggggatgatgaagctgaa
tctgtcgatatcctcgcggttaacggcatgattgccgatattgatgcgcgtatgggacgc
cagatggatctcattctccatgccccggagtttcaggagctggagtcattcctgcgctca
ctgaagctactggttgaccatgccgatccgcgtgaaaacataaaaattcatatcatgcac
gccaccaaagaggagctgctggatgactttgaatttgccccagaaatcactcagtcagga
ttttaccggcatgtttattccagcggtttcggacagtttggtggagaacctgtcgccgcc
gtaattggtaactacactttcgataacaccaccgcagatatgaagctgctgaaatatatc
agcgcggttagcgcaatggctcacagtccattcctgtcttcagtttctccggagtttttt
gggttggattcgtttaccgaacttcccggcattaaagacgtcgccgccattttcgaagga
cccgcttacacaaaatggcgttcactgcgtgaatcagaagatgcccgcaatctgggcctg
acggcaccacgcttcctgctgcgtcacccttatgcacctgatgaaaatccggtgaaaagt
tttaactatcatgaagatgtcagcaaaaatcacgagcattatctgtggggaaacacggca
tttcttctggcggccaatatggctgaaagtttcatgtcaacccgctggtgcccgaatatt
gtcggtccgcaaagtggcggcgcggtcaaagacctgcctgtgcatttatatgaggcaatg
ggccagctacaggccaaagttccgacagaaattctcattaccgacaggcgagaatatgag
ctggcagagcagggttttatcaccctgacgatgcgtaaaggctctgataacgcagctttc
ttttctgccaattcggtgcaaaaaccgaaagttttcccgaatacaccagaaggtaaagag
gctgaaaccaactacaaactcggtacgcagctcccttacctttttattatcaacaggctg
gcacattacatcaaagtgctgcaacgcgaacagcttggctcctggaaagaaagaggagat
ctggagcgtgaactgaatacctggattcgccagtatgttgccgaccaggaaaacccacct
tctgaagtccgcagtcgtaagccattacgccaggcgaagattgaagtctccgatgtggaa
ggcgagccaggctggtatcaggttgctctgagcgtccgtcctcatttcaagtatatgggg
gcatcgtttgaattgtccttagtcggacgtctggacagggagtga

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