Citrobacter amalonaticus FDAARGOS_165: AL524_23830
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Entry
AL524_23830 CDS
T04738
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Pathway
caf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL524_23830 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caf03019
]
AL524_23830 (pnp)
03016 Transfer RNA biogenesis [BR:
caf03016
]
AL524_23830 (pnp)
Enzymes [BR:
caf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AL524_23830 (pnp)
Messenger RNA biogenesis [BR:
caf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AL524_23830 (pnp)
Transfer RNA biogenesis [BR:
caf03016
]
Prokaryotic type
tRNA degradation factors
AL524_23830 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
aRib
OB_RRP5_4th
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AMG55878
UniProt:
A0AAP5RSL0
LinkDB
All DBs
Position
complement(4985027..4987162)
Genome browser
AA seq
711 aa
AA seq
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MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIKEINELVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDESLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTTR
DAQSLDELMGERTDNFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPDLDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPVSEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggtcagcataccgttacgctggaaacc
ggcatgatggcccgtcaggccactgccgctgttatggttagcatggatgacacggcggta
ttcgtgaccgttgtcggccagaaaaaagcgaagccgggccaggacttcttcccgctgacc
gttaactatcaggagcgtacctacgctgctggccgcatcccaggtagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggtttcgtgaacgaagttcaggttatcgcaaccgtcgtttccgtt
aacccgcaggttaacccggatatcgtcgcgatgatcggtgcctctgctgcactgtctctg
tctggtattccgttcaacggcccaatcggtgcggcacgtgtgggttatatcaatgaccag
tacgtactgaacccgactcaggacgagctgaaagagagcaaactggatctggtcgttgcc
ggtacggaagccgccgtactgatggttgaatccgaagcagaactgctgagcgaagaccag
atgctgggtgctgtcgtgtttggtcacgaacagcagcaggtggttatcaaagaaatcaac
gaactggtgaaagaagccggtaaaccacgttgggactggcagccggaagcggtgaacgaa
gcgctgaacgcgcgcgttgcagccctggcagaatctcgcctgagcgacgcttaccgtatc
accgacaaacaagagcgttatgctcaggttgacgtgatcaagtctgaaaccatcgcaacg
ctggttgcagaagatgagtccctggacgctaacgaactgggtgaaatcctgcacgcaatc
gagaaaaacgtggtgcgtagccgtgtactggccggcgaaccgcgtattgatggccgcgaa
aaagacatgatccgtggtctggacgtgcgtactggcgtactgccacgtacccacggttcc
gcactgttcactcgtggcgaaactcaggcgctggttaccgcaaccctgggtaccacccgt
gatgcgcagagcctcgacgaactgatgggcgagcgtactgacaacttcctgttccactac
aacttccctccgtactgcgtcggcgaaaccggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtgatgccggatctggataaa
ttcccgtacaccgtgcgtgtggtttctgaaatcaccgaatccaacggttcttcttccatg
gcttccgtgtgtggtgcctctctggcgctgatggacgcaggcgtgccgatcaaagcggcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaactacgttgttctgtctgac
atcctgggcgacgaagatcacctgggcgatatggacttcaaagttgcgggctcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgctctgaaccaggctaaaggtgcgcgtctgcatatcctgggcgtgatggaacaggcg
attaacgcgccacgcggcgacatttctcagtttgcaccgcgtatccacaccattaagatc
agcccggacaaaatcaaagatgtgatcggtaaaggcggttctgtgatccgtgcgctgacc
gaagagactggcaccaccatcgaaatcgaagatgacggtaccgtgaaaatcgcagcaacc
gacggtgaaaaagcgaaatacgcaattcgccgtatcgaagagatcaccgcagaaatcgaa
gtgggccgtatctacaacggtaaagtgacccgtatcgtcgactttggtgcgttcgttgcc
atcggcggcggtaaagaaggtctggtacacatctcgcagatcgcagataagcgcgttgag
aaagtgaccgattacctgcagatgggccaggaagtaccggttaaagttctggaagttgac
cgccagggccgtgtacgtctgagcattaaagaagcaactgaacaatctcagcctgccgcc
gcaccggaagctccggtaagcgaacagggcgagtaa
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