Corynebacterium afermentans subsp. lipophilum: CAFEL_00060
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Entry
CAFEL_00060 CDS
T09361
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cafe03032
]
CAFEL_00060 (gyrA)
03400 DNA repair and recombination proteins [BR:
cafe03400
]
CAFEL_00060 (gyrA)
Enzymes [BR:
cafe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CAFEL_00060 (gyrA)
DNA replication proteins [BR:
cafe03032
]
Prokaryotic type
DNA Topoisomerases
CAFEL_00060 (gyrA)
DNA repair and recombination proteins [BR:
cafe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAFEL_00060 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_NUP159_NUP214
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
WJY57813
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Position
12178..14727
Genome browser
AA seq
849 aa
AA seq
DB search
MADDTTGGMDRIQPIDINEEMQTSYIDYAMSVIVGRALPEVRDGMKPVHRRVIYAMYDAG
FRPERSYVKSVKAVGETMSNYHPHGDSAIYDTLVRMAQPWSMRYPLVDGQGNFGSPGNDG
PAAMRYTECKLTPIAMEMVRDIRENSVDFAPNFDSKTQEPTVLPSRVPNLLMNGSNGIAV
GMATNIPPHNLNELAEAIYWILENHDAEEKETLDAVMERVKGPDFPTAGLIVGDQGIKDA
YATGRGSIRMRGVTEIEEIGNRQVITITELPYQINPDNFIHNIAEQVTAGKMVGISKIED
ESSDRVGMRIVVTLKRDAVPRVVLNNLYKHSALETNFSANMLSIVDGVPRTLRLDQMLRF
YVKHQIEVIVRRTQYRLDEAEKRAHILRGLVKALDMLDEVIALIRRSPTVDDARQGLINL
LDIDEIQANEILAMQLRRLAALERQKIIDDLAAIEKQIADYKDILAKPERQRAIVGDELK
EIVDKYGDERRTQIVAATGDVTEEDLIARENVVVTITSTGYAKRTKVDAYKSQKRGGKGV
RGAELKQDDVVKNFFICSTHDWILFFTNFGRVYRLKAYELPEAGRTARGQHVANLLEFQP
EEKIAQIIQIQTYEDAPYLVLATRDGRVKKSRLTDYESARSAGLIAINLNEGDALIGASL
VGEDDDLLLVSEQGQSIRFSADDEQLRPMGRATAGVKGMRFKGDDQLLAMTVAKDGEYLL
VATSGGYGKRTAIEEYNAQGRGGMGVMTFKYSPKRGKLIGALSVAEDDQIFAITSAGGVI
RTEVDQIRPSSRATMGVRLVDLADGVELLAIDRNVEDEGEEEATAVATGQKTIEQALSDD
SSDAGEDKE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacaccactggcggcatggaccgcattcaaccaatcgacatcaacgaggag
atgcagaccagctacatcgattacgccatgagcgtgatcgtgggtcgcgcgctccccgag
gtgcgcgacggcatgaagccggtgcaccgccgcgtgatctacgcaatgtacgacgcgggt
ttccgccccgaacgctcctacgtcaagagcgtgaaggccgtcggcgagaccatgagtaac
taccacccgcacggcgacagcgccatctacgacaccctcgtgcgcatggcgcagccgtgg
tccatgcgctacccgcttgtggacggccagggcaacttcggttccccgggcaacgacggc
ccggccgctatgcgttacacggagtgcaagctcaccccgatcgccatggagatggtgcgc
gacatccgcgaaaactccgtggacttcgccccgaacttcgactccaagacccaggagccg
accgtcctgccgtcccgcgtgccgaacctgctgatgaacggctccaacggtattgcggtg
ggcatggccaccaacatcccgccgcacaacctgaacgagctggcggaggccatctactgg
atcctggaaaaccacgacgccgaggagaaggagaccctcgacgccgtgatggagcgcgtg
aagggaccggacttccccacggcgggcttgatcgtgggcgaccagggtattaaggacgcc
tacgccaccggccgcggctccatccgcatgcgcggcgtgacggaaatcgaggagattggc
aaccgccaggtcatcacgatcaccgagctgccgtaccagatcaacccggataacttcatc
cacaacatcgccgagcaggtcaccgccggcaagatggtgggcatctccaagatcgaggac
gagtcctccgaccgcgtgggcatgcgcatcgtggtcacgctcaagcgcgacgcggtgccg
cgcgtggtgctgaacaacctgtacaagcactcggcgctggagacgaacttctccgccaac
atgctcagcattgtcgacggcgtcccgcgtaccctgcgcctggaccagatgctgcgcttc
tacgtcaagcaccagatcgaagtcattgtccgccgcacccagtaccgcctggacgaggcc
gaaaagcgcgcccacatcctccgcggcctagtcaaggcgctggacatgctggacgaggtc
atcgccctgatccgccgttcgccgaccgtggacgacgcccgccaaggcctcatcaacctg
ttggacatcgacgagatccaggccaacgagatcctggccatgcagctgcgccgcctggcc
gccctggagcgccagaagatcatcgacgaccttgccgcgattgagaagcagatcgcggac
tacaaggacatcctggccaagccggagcgtcagcgcgcgattgtcggcgacgagctcaag
gagatcgtcgataagtatggcgacgagcgccgcacccagatcgtcgccgccaccggcgac
gtcactgaggaagaccttatcgcccgcgaaaacgtggtggtcaccatcacctccaccggc
tacgccaagcgcaccaaggtggacgcctacaagagccagaaacgcggcggcaagggcgtg
cggggcgccgagctgaagcaggacgacgtggtgaagaacttcttcatctgctccacccac
gactggatcctgttcttcaccaacttcggccgcgtctaccgcctcaaggcctacgagctg
ccggaagcgggccgcaccgcccgtggccagcacgtggccaacctgctggaattccagccg
gaggaaaagatcgcgcagatcatccagatccagacctacgaggacgccccctacctggtg
ctggccacgcgcgacggccgcgtgaagaagtcccgcctcaccgactacgaatccgcccgc
tccgccggcctgatcgccatcaacctcaacgagggcgacgcgctcatcggcgcctccctt
gtcggcgaggacgacgacctgctgctcgtgtccgagcagggccaatccatccgcttctcc
gccgacgacgagcagctgcgccccatgggccgcgccaccgccggcgtgaagggcatgcgc
ttcaagggcgacgaccagctgctggccatgaccgtggccaaggacggcgaatacctcctc
gtggccacctccggcggctacggcaagcgcaccgccatcgaggagtacaacgcgcagggc
cgcggcggcatgggcgtgatgaccttcaagtacagcccgaaacgcggcaagctcatcggc
gccctctcggttgcggaggatgaccagatcttcgccatcacctccgccggcggcgtgatc
cgcaccgaggtcgaccagatccgcccgtcctcgcgcgcaaccatgggcgtgcggctggtg
gacctcgccgacggcgtggagcttctggccatcgaccgcaacgtcgaggacgaaggcgag
gaggaagccaccgcagtcgccaccgggcagaagaccatcgagcaggcgcttagcgacgac
agctccgacgccggcgaggacaaggagtag
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