Corynebacterium afermentans subsp. lipophilum: CAFEL_00180
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Entry
CAFEL_00180 CDS
T09361
Symbol
pbpA
Name
(GenBank) Penicillin-binding protein A
KO
K05364
penicillin-binding protein A
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00550
Peptidoglycan biosynthesis
cafe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CAFEL_00180 (pbpA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cafe01011
]
CAFEL_00180 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cafe01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CAFEL_00180 (pbpA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WJY57835
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Position
complement(47453..48907)
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AA seq
484 aa
AA seq
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MNKSIRYGAVVALLMIAALLVNFTVVQGLREDEYAQNQHNSRILMDLKRTNRGDIVAGET
VLAQSHRDEETGFYQRAYPNMPFSFAPIVGFVSDQFGTSQMEATYNGDLTGDSGTASRFL
RTGLEDGKKGDTVDLTLDPNLQAFSYDQLAKPGFDGAVVAVRASTGEVLSMASTPSFDPN
GIANPATAEGAWAEATGNPANPLLNHAAQEQLPPGSIFKIVTTAAGLRNGFTPESPLTGE
AQTILPGTDNIPLTNYGGQACAGGGQVPLRTAFALSCNTAFVQMGLAMGPDALRDAAARF
GVGERYNLGLPNAAGSLGELPGGAEVAQSAIGQRDVTMTALQAAMMSATIANKGKRMEPH
VVRQVRNADGKVLHETEPVELNEAVTEQEAATITDLMFASERWTFGYDGNGFASKTGTAE
HAEGAAPHVWYVAFDPAKDVAVAVVVKNGGNLGEAATGGQVAGPIGRAVLRAAPAAPAPV
EGAE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtccatccgctacggcgccgtggtcgcgctgctgatgatcgcggcactactg
gtcaacttcaccgtggtccagggcctgcgcgaagacgagtacgcacagaaccagcacaac
tcccgcatcctcatggacctcaagcgcaccaaccgcggcgacatcgtcgcgggcgagacc
gtgctggcccaaagccaccgcgacgaggaaaccggcttctaccagcgcgcctaccccaac
atgccgttctcgttcgcgcccatcgtcggttttgtctccgaccagttcggcacctcccag
atggaggccacctacaacggcgatctcaccggcgactccggcaccgcctcgcgtttcttg
cgcaccggtctcgaggacggcaaaaagggcgacaccgtcgacctgaccctggacccgaac
ctgcaggccttctcgtacgaccagctggccaaaccgggctttgatggtgcggtggtggcc
gtgagggcgtcgacaggcgaagtgctctccatggcctcgacccccagcttcgaccccaac
ggcattgccaacccggcgaccgccgagggcgcctgggccgaagccaccggcaaccccgcg
aatccgctgctaaaccacgcggcgcaggagcagctgccaccgggctcgattttcaagatc
gtcaccaccgccgcgggcctgcgcaacggcttcacgccggagtcgccgctgaccggcgag
gcgcagacgatcctgccgggcacggacaacatcccgctgaccaactacggcggccaggcc
tgcgccggtggcggacaggtgccgctgcgcaccgcgttcgccctgtcctgcaacaccgcg
ttcgtacagatgggccttgctatgggcccggatgcgctgcgcgacgccgccgcccgcttc
ggcgtcggcgagcgctacaacctgggcctgcccaacgccgccggctcgctgggcgagctg
cccggcggggccgaggtggcgcagtccgccatcggccagcgcgacgtgaccatgactgcg
ctgcaggcggcgatgatgtctgcgaccatcgcgaataagggcaagcgcatggaaccgcac
gtggtgcggcaggtgcgcaacgccgacggcaaagtcctgcacgaaaccgagccggtggag
ctgaacgaggccgtaacggaacaagaagccgcaacgatcacggacttgatgttcgcgtcc
gagcggtggaccttcggctacgacggcaacggcttcgcctctaagaccggcacggccgag
cacgccgaaggcgccgccccgcacgtgtggtacgtggcgttcgacccggccaaggacgtc
gccgttgccgtggtggtaaaaaacggcggcaacctcggcgaggccgctaccggcggccaa
gtcgccggaccgatcggacgcgccgtgttgcgcgcagcacccgccgcccccgcacccgtg
gaaggagcagagtag
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