Corynebacterium afermentans subsp. lipophilum: CAFEL_00855
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Entry
CAFEL_00855 CDS
T09361
Name
(GenBank) putative ATP-dependent helicase Lhr
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
CAFEL_00855
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GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WJY57961
LinkDB
All DBs
Position
complement(200351..202696)
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AA seq
781 aa
AA seq
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MVSPFGTELLGALKRRHPAATITHVEHVPARHARYGEWPGWVEPRLKQLLIDEGFASPYL
HQAQCAEHAWRCSDVVVATGTSSGKSLGYQLPVLTTLAQDPTACAVYLTPTKALGSDQLQ
ATLRMVQAAGLEGIHPAPYDGDTPAESRAGIREHTRYVFTNPDMLHASVLGSHARWARVL
RHLKYVVVDECHTYRGVFGANVALVLRRLLRIAAAYGASPTVIYASATAADPAGQARRLS
GREAVAITDDAAPAGERTIVLWEPGFIEGAEGEGGAPVRYPATTEAASVSAELLLQGART
LTFVRSRRAAETVAMRTQEHLSAAGRADVAERVAPYRAGYLAEDRRELERRLDNGELLGV
ASTNALELGIDVGGLDAVVMAGFPGTVASFRQQAGRAGRRGQSSVAVLVARDEPMDTYLV
HHPDALLGTPVENSVFDPTNPFILRGHVYCAAVERPLSEADVEAFGARDVVDDLTAAGLL
RRRPAGWFAVPQLDGEVTPESAHASVSLRGGVGEQVMIVDVTDGRLLGTVDAARAMSQVH
DGAVYIHQGEYFVVQALDLDDYVALVAPERPDYSTQARSTTDITILGEAHQLVNPSPGLW
VASVDVVVIDRVTGYVVRLSDGTVSEHIPLDLPEQRLVTRAVAYTIDPMVLDELGITAGE
IPGALHAAEHAAIGLLPLLATCDRWDIGGVSTALHPDTMLPTVFVYDGHPGGAGFADEGF
ARFHEWIEATWETVRSCGCEDGCPSCVQSPKCGNGNQPLDKRAALKLLGALVTMTAGGAP
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggtttccccgttcggtactgagctgctcggcgcgctgaagcgccgccaccccgcggcg
acgatcacgcatgtcgagcacgttcccgcacgtcacgcccgttacggcgagtggccgggg
tgggtggagccgcgtttgaagcaattgcttatcgacgaaggcttcgcctccccctacctc
caccaagcccagtgcgcagaacatgcgtggcgctgcagcgatgtggtggtggcgacgggg
acgtcttccggcaagtctttgggctaccaactgccggtgctgaccacgttggcgcaggat
ccgacggcgtgcgcggtgtatctgacgccgacgaaggcgctgggctcggaccagctgcag
gccacgctgcggatggtgcaggccgcggggctggagggcatccacccggcgccttacgac
ggggacacgcccgcggagtcgcgcgcgggcattagggagcacacgcgctatgtgttcacc
aacccggacatgctgcacgcgtctgtattgggctcgcacgcgcggtgggcgcgggtgctg
cggcatttgaagtacgttgtggtggacgagtgccacacctaccggggagtcttcggcgcg
aatgtggcgctggtgctgcgacggctgttgcgcatcgcggccgcctacggtgcgtcgccg
acggtgatttacgcctccgccaccgcggcggacccggcggggcaggctcgccggttgagc
ggccgcgaggcggtggccataaccgacgacgccgccccggccggcgagcgcaccatcgtg
ttgtgggagcccggcttcatcgaaggggcggaaggcgaaggtggcgcgccggtgcgctac
cccgccaccacggaggctgcttcggtgtcggcggagctgttgctgcagggtgcgcggacg
ttgacgttcgtgcggtcccggcgcgccgcggagacggtggcgatgcgcacccaggagcac
ctgtcggcggcgggccgcgctgatgtggccgagcgggtcgcgccgtaccgggcggggtat
ttggcggaggaccgccgcgagctggagcgccgcctggacaacggtgagctgttgggcgtg
gcgtccacgaacgcgctggagctgggcatcgacgtcggcggcttggacgcggtggtgatg
gcggggtttccgggcacggtggcgtcgtttcgccagcaggcggggcgcgcgggccggcgc
gggcagagctcggttgcggtgctggtggcgcgcgacgagccgatggacacctacctggtc
caccaccccgacgcgcttctgggcacgccggtggagaattcggtgttcgaccccaccaac
ccgttcattttgcgcgggcacgtgtactgcgccgcggtggagcggccgttgagtgaggcc
gacgtggaggcgttcggtgcgcgcgacgtggtggacgacctgacagccgcaggcttgttg
cgccgccggccggccggctggttcgcggtgccgcagctggacggcgaggtcacgccggag
tcggcgcacgcctcggtgtcgctgcgcggcggggttggtgagcaggtgatgatcgtggac
gtcaccgacgggcggctgctcggcaccgtggacgcggcgcgcgcgatgagccaggtgcac
gacggggcggtgtacatccaccagggcgagtacttcgtggtccaggcgctggatctggac
gactacgtggcactcgtggcgccggagcggccggactactccacgcaggcgcgctcgacg
acggacatcacgatcctgggcgaggctcaccagctggtcaacccctcgccggggctgtgg
gtggccagcgttgacgtggtggtcatcgaccgcgtcaccggttacgtggtgcggctttcc
gacggcaccgtcagcgaacacatccccctcgacctgcccgagcagcgcctggtcacccgc
gcggtggcgtacaccatcgacccgatggtgctggacgagctgggcattaccgccggcgag
atcccgggcgcgctgcacgccgccgagcacgccgcgatcgggctgctgccgcttttggca
acgtgcgaccgctgggacatcggcggcgtgtccaccgcgctgcacccggacacgatgttg
cccacggtgttcgtctacgacggccaccccggcggcgcgggtttcgccgacgagggcttc
gcccgcttccacgagtggatcgaggcgacctgggagaccgtgcgctcatgcggctgcgag
gacggctgcccgtcgtgcgtgcagtcgccgaagtgcggcaacggcaaccagccgctggac
aagcgcgccgcgctgaagctgctcggcgcgcttgtgaccatgacggcgggcggggcaccg
cgctag
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