Corynebacterium afermentans subsp. lipophilum: CAFEL_01055
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Entry
CAFEL_01055 CDS
T09361
Symbol
fadD1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00061
Fatty acid biosynthesis
cafe00071
Fatty acid degradation
cafe01100
Metabolic pathways
cafe01212
Fatty acid metabolism
cafe02024
Quorum sensing
cafe04146
Peroxisome
Module
cafe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CAFEL_01055 (fadD1)
00071 Fatty acid degradation
CAFEL_01055 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CAFEL_01055 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CAFEL_01055 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cafe01004
]
CAFEL_01055 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cafe04147
]
CAFEL_01055 (fadD1)
Enzymes [BR:
cafe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CAFEL_01055 (fadD1)
Lipid biosynthesis proteins [BR:
cafe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CAFEL_01055 (fadD1)
Exosome [BR:
cafe04147
]
Exosomal proteins
Exosomal proteins of breast milk
CAFEL_01055 (fadD1)
Exosomal proteins of breast cancer cells
CAFEL_01055 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WJY58000
LinkDB
All DBs
Position
complement(242480..244216)
Genome browser
AA seq
578 aa
AA seq
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MALTPSNVNDVKPWLQYYPEWTAHSLEYGEITLGELYQQNLSKNVSRIATRFFGRTQTFG
ELDREVRRAAAGLKAFGVRPGDRVAIMLPNCPQHVAAFFAVQMIGGVVVEHNPLYTAHEL
RPQFIDHGARIAIAWDKAADTLEKLRADTPLETVVSVNMTKAMPRAQQLALRIPLPKILE
ARAALTATSKNTSLHTVPWESLTSSAIGGLGADLQTPEEITADSTAVILYTSGTTGTPKG
AALSHRNLIANPLQGQAWVNELQQGNQRMLATLPFFHAYGLTFSLTLTMLVGSELVLLPA
PKMDLIMKAIRITPPTFIPGVPTVFERIVKTAKKKNVDLSDIKIGFSGASSLPAEVIEDW
ERATGGRLVEGYGLTETSPIIVGNPESSDRRPGYIGIPFPDTQIRIVNPDNPDEDMPFGE
AGEILAKGPQVFSGYFNNPEATEKVFHDGWFRTGDMGIMEEDGFIKLVSRIKELIITGGF
NVYPAEVEEVIRTHKDVADVAVVGRPREDGSEDVVACIVLNDGSALDPDGLKDFARERLT
RYKVPRTFYHFDELAKDQMGKIRRREVRDDLLSKLAER
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaccccatcgaacgtcaacgacgtcaaaccctggctgcagtactaccccgag
tggaccgcgcactcgctcgagtacggcgagataaccctcggcgagctgtaccagcagaac
ctgtcaaagaacgtctcgcgcatcgccacccggtttttcggccgcacccaaaccttcggc
gagctcgaccgcgaagtgcggcgcgccgccgccggcctgaaggctttcggcgtgcgcccc
ggcgaccgcgtggccatcatgctgcccaactgcccccaacatgtcgccgcctttttcgcc
gtgcagatgatcggcggcgtggtggttgagcacaaccccctctacaccgcccacgagctg
cgcccccagttcatcgaccacggcgcgcgcatcgccatcgcctgggacaaagccgccgac
acgctggagaaactgcgcgcggacaccccgctggaaaccgtggtcagcgtcaacatgacc
aaggccatgccgcgcgcccagcagctcgccctgcgcatcccgctgccgaagatcctggag
gcccgcgcagcactcaccgccaccagcaagaacacctccctgcacaccgtgccctgggag
tcgctgaccagctccgccatcggcggtttgggcgcggacctgcaaacgccagaagagatc
accgcggactccaccgccgtgatcctctacacctccggcaccaccggcacccccaagggc
gcggcgctgtcgcaccgcaacctcattgcaaacccgctgcagggccaggcctgggtcaac
gagctgcagcaaggcaaccagcgcatgctggccaccctgccgttcttccacgcctacggc
ctgacgttctccctgacgctgaccatgctggtcggctccgaactcgtgctgctgccggcg
ccgaagatggacctgatcatgaaggccatccgcatcaccccgcccaccttcatcccgggc
gtgcccaccgtcttcgagcgcatcgtgaaaacggcgaagaagaaaaacgtggacctctcc
gacatcaaaatcggtttctccggtgcgtcgtccctgcccgcagaggtcatcgaggactgg
gagcgcgccaccggcggccgcctcgtcgagggctacggcctcaccgaaacctcccccatc
atcgtgggcaaccccgaatcctcggaccgccgccccggctacatcggcatccccttcccc
gacacccagatccgcattgtcaaccccgacaacccggacgaggacatgccgttcggcgaa
gccggcgagatcctggccaagggcccccaggtattctccggctacttcaacaaccccgaa
gccaccgaaaaggtcttccacgacggctggttccgcaccggcgacatgggaatcatggaa
gaagacggctttatcaagctggtctcccgcatcaaggaactcatcatcaccggcggcttc
aacgtctacccggccgaggtcgaggaggtcatccgcacccacaaggacgtcgccgatgtc
gcggtcgtgggccgcccgcgcgaagacggatccgaggatgtcgtcgcatgcatcgtgctt
aacgacggctccgccctcgaccccgacggcctcaaagacttcgcccgcgagcgcctgacc
cgctacaaggtcccgcgcaccttctaccacttcgacgagctggcgaaggaccagatgggc
aagatccgccgccgcgaagtgcgcgacgacctgctgtccaagctcgccgagcgctag
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