Corynebacterium afermentans subsp. lipophilum: CAFEL_02020
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Entry
CAFEL_02020 CDS
T09361
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAFEL_02020 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cafe03019
]
CAFEL_02020 (groL1)
03110 Chaperones and folding catalysts [BR:
cafe03110
]
CAFEL_02020 (groL1)
03029 Mitochondrial biogenesis [BR:
cafe03029
]
CAFEL_02020 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cafe04147
]
CAFEL_02020 (groL1)
Enzymes [BR:
cafe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CAFEL_02020 (groL1)
Messenger RNA biogenesis [BR:
cafe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CAFEL_02020 (groL1)
Chaperones and folding catalysts [BR:
cafe03110
]
Heat shock proteins
HSP60 / Chaperonin
CAFEL_02020 (groL1)
Mitochondrial biogenesis [BR:
cafe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CAFEL_02020 (groL1)
Exosome [BR:
cafe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CAFEL_02020 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
CAFEL_02020 (groL1)
Exosomal proteins of breast cancer cells
CAFEL_02020 (groL1)
Exosomal proteins of colorectal cancer cells
CAFEL_02020 (groL1)
Exosomal proteins of bladder cancer cells
CAFEL_02020 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
WJY58189
LinkDB
All DBs
Position
422803..424410
Genome browser
AA seq
535 aa
AA seq
DB search
MAKLIAFDQEAREGIQRGVDTLADAVKVTLGPRGRNVVLSKSWGGPTVTNDGVTIARDID
LEDPFENLGAQLVKSVAVKTNDIAGDGTTTATLLAQALVSEGLRNVAAGANPIELNKGIK
AAAEKVVEELKARATEVQSSAEIANVATVSSRDPEVGEMVAGAMDKVGKDGVLTVEESQS
IDSYVDLTEGISFDKGFLSPYFMTDPDAGQAVLEGARVLLVRGKISSLPDFLPLLEQAAS
ESVPLFVVAEDIEGEALQALVVNSIRKVLKVVAVKSPYFGERRKAFMDDLAVVTAATVID
PEVGVNLKDATLEHLGSARRVTVTKDDTVIVDGAGTAEAVEDRRNQIRREIESTDSTWDK
EKAEERLAKLSGGVAVLRVGAATETEQNERKLRVEDAINAARAAAEEGIIAGGGSALVQI
AKQLEEFADGFDGEQKTGVLAVARALSKPAFWIADNAGLDGAVVVSKIAEMPNGEGFNAA
TLEYGNLIEQGIIDPVKVTHNAVVNAASVARMVLTTEASVVTKPAEEDEQEDHAH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactcatcgcatttgatcaggaggcccgcgagggtatccagcgcggcgtggac
acgctcgccgacgcggtgaaggtcacgctcggcccccgcggccgcaacgtcgtgctgtcc
aagtcctggggtggcccgaccgtcaccaacgacggcgtgaccatcgcccgcgacatcgac
ctcgaggacccgtttgaaaacctcggtgcccagttggtgaagtccgtcgccgtgaagacg
aacgacatcgccggcgacggcaccaccaccgcaacgcttttggcccaggcgctcgtctcc
gaggggctgcgcaacgtcgcggccggcgcgaacccgatcgagctgaacaagggcattaag
gccgctgccgagaaggtcgtcgaggagctcaaggcccgcgcgaccgaggtgcagtcctcc
gcagagatcgcgaacgtggccaccgtgtcctcgcgcgacccggaggtcggcgagatggtc
gccggcgccatggacaaggtgggcaaggacggcgtgctcaccgtcgaggagtcccagtcc
atcgactcctatgtggacctcaccgagggcatctcctttgacaagggcttcctctccccg
tacttcatgaccgacccggacgccggccaggccgtgctcgagggtgcccgcgtgctgctg
gtgcgcggcaagatttcctccctgccggacttcctgccgcttctggagcaggccgcctcc
gagtccgtgccgctgttcgtggtggcagaggacatcgagggtgaagcgctgcaggcgctg
gtggtcaactccatccgcaaggtgcttaaggtcgtcgccgtgaagtcgccgtacttcggc
gagcgccgcaaggcgtttatggacgacctcgcggtggtcaccgccgcgaccgtgatcgac
ccggaggtcggcgtcaacctcaaggacgccaccctggagcacctcggctccgcccgccgc
gtgacggtgaccaaggacgacaccgtcatcgtcgacggcgccggcaccgccgaggcagtg
gaagaccgccgcaaccagatccgccgcgagatcgaatccaccgactcgacctgggacaag
gagaaggcggaagagcgcctggccaagctgtccggcggtgtggcggtgctgcgcgtcggc
gccgccaccgagaccgagcagaacgagcgcaagctgcgcgtcgaggatgccatcaacgcc
gcccgcgcggcggcggaggagggcatcatcgccggcggcggctccgcgctggtgcagatc
gccaagcagctcgaggagttcgccgacggcttcgacggcgagcagaagaccggcgtgctg
gccgtggcccgcgcgctgtccaagccggcgttctggatcgccgataacgcgggcctcgac
ggtgccgttgtggtgtccaagatcgccgaaatgccgaacggcgagggcttcaacgccgcg
acgctcgagtacggcaacctcatcgagcagggcatcatcgacccggtgaaggtcacccac
aacgcggtggtcaacgccgcgtctgtggcgcgcatggtgctcaccacggaagcgtctgtg
gtgaccaagcccgccgaggaagacgagcaggaggaccacgcgcactag
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