Corynebacterium afermentans subsp. lipophilum: CAFEL_02295
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Entry
CAFEL_02295 CDS
T09361
Symbol
dacB1
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacB precursor
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00550
Peptidoglycan biosynthesis
cafe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CAFEL_02295 (dacB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cafe01002
]
CAFEL_02295 (dacB1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cafe01011
]
CAFEL_02295 (dacB1)
Enzymes [BR:
cafe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CAFEL_02295 (dacB1)
Peptidases and inhibitors [BR:
cafe01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CAFEL_02295 (dacB1)
Peptidoglycan biosynthesis and degradation proteins [BR:
cafe01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CAFEL_02295 (dacB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Transpeptidase
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
WJY58244
LinkDB
All DBs
Position
complement(483280..484536)
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AA seq
418 aa
AA seq
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MKRVLAAATALSFCLSTTAHAQDAETPTETTSPAGPTVGYYDEGGNWVPPSRGRAPDTDN
CPQATWPPEPVSTSERAAASPDPLPVLFDGPCGVTAADGYTTPDGVVASAWLVADLDSGD
VVAMKDPHGRYRPASIIKVLLALTVIDELPLDQKVEVSAESAGQEGSAAGIGEGGDYTVE
DLLTGLLLSSGNDCAHALAQALGGDELALGKVNALAKKLGMADTRATSYSGLDGAGMSTS
AWDMGLAYTAAFADPTFARIVDTEHTTFPGFDDLPPFELWNDNQLYLNDPDGIGGKTGYT
DDANHTFVGAVNHEGRRLVAVVLDTAAYDHRPWEQAQMLLHEAYGVRSSVAKLEPLAEKT
TVTPETTTAAPTPAPERAGEETAWNRWWSYLIVVAVLALAALATAFSLGTGEKPRRRR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgtgctcgcagcggcgacagcattgagcttttgcttgtcgacgacagctcac
gcccaagacgcggaaaccccgaccgaaaccacctccccggccggcccgaccgtcggctac
tacgacgagggcggcaactgggtcccgcccagccggggccgcgcgcccgacaccgacaac
tgcccacaggccacttggccgccggagccggtgtccacctccgagcgcgccgccgcctcc
cctgacccgctgccggtgcttttcgacggcccctgcggcgtgaccgccgccgacggctac
accacccccgacggcgtagtcgcctccgcctggctggtcgccgacttagattccggcgac
gtggtggcaatgaaggacccgcacggtcgctaccggccggcctcaatcatcaaggtgctg
ttggcactgaccgtcatcgacgagctgccgctagaccagaaggtcgaagtctccgccgaa
tccgccggccaggaaggctccgccgccggcatcggcgaaggcggcgactacaccgtcgaa
gacctgctcaccggcctgctgttgtcctcgggcaacgactgcgcccacgcgctcgcccaa
gccctcggcggagacgagctcgcactcggcaaggtcaacgcgctggccaagaagctcggc
atggccgatacccgcgccacctcctactccggcttggacggcgcagggatgtccacctcc
gcctgggacatgggcctggcctacaccgcggccttcgcggaccccaccttcgcccgcatc
gtcgacacggagcacaccaccttccccggcttcgacgacctgccgccgttcgagctgtgg
aacgacaaccagctctacctcaacgacccggacggcatcggcggcaagaccggctacacc
gacgacgcgaaccacacgttcgtcggcgctgtgaaccacgaaggccgccgcctcgtcgcg
gttgtgctggacaccgcggcatacgaccaccgcccctgggagcaggcgcagatgctcttg
cacgaggcgtatggggtgcgaagctccgtcgcaaagcttgagcctctcgctgagaagacc
accgtcaccccagaaaccacaacggccgcccccacccccgcgcctgaacgcgctggggag
gagacggcttggaaccgctggtggtcctacttgattgtggtggccgtactcgcgctcgcc
gcgctggccaccgcgtttagtctcgggacaggagagaaaccacgccgacgccgatag
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