Corynebacterium afermentans subsp. lipophilum: CAFEL_02350
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Entry
CAFEL_02350 CDS
T09361
Symbol
cfiB
Name
(GenBank) 2-oxoglutarate carboxylase small subunit
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00020
Citrate cycle (TCA cycle)
cafe00620
Pyruvate metabolism
cafe00720
Other carbon fixation pathways
cafe01100
Metabolic pathways
cafe01120
Microbial metabolism in diverse environments
cafe01200
Carbon metabolism
cafe01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CAFEL_02350 (cfiB)
00620 Pyruvate metabolism
CAFEL_02350 (cfiB)
09102 Energy metabolism
00720 Other carbon fixation pathways
CAFEL_02350 (cfiB)
Enzymes [BR:
cafe01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
CAFEL_02350 (cfiB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_3
GCV_H
ATPgrasp_ST
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
WJY58255
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All DBs
Position
492938..496366
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AA seq
1142 aa
AA seq
DB search
MNPDNLPLHDLPTFNKILVANRGEIAVRAFRAAFETGAKTVAVYPREDRNSFHRPFADEA
VQIGEPGQPVKAYLDIDEIIRAAKQTGADAIYPGYGFLSERADLARACRDNGIKFIGPSP
ETLDLTGDKSAAVQAAERAGLPVLKDSEPSDDPKQLAEYAKDFEFPVFVKAVAGGGGRGM
RFIERPEDVEKLAAEASREAEAAFGDPNVYIERAVIRPQHIEVQIMADSHGNVVHLFERD
CSVQRRHQKVVEIAPAQHITEEQRQRICQDAVNFCKEINYEGAGTVEFLVDEAGNHVFIE
MNPRVQVEHTVTEEVTGIDIVKNQMYIAAGAQLEQIHLTQDLIEVNGAALQCRITTEDPA
NGFRPDSGVVTGYASPGGAGVRLDGNVAVGTTITPNFDSLLVKMTCRGRNFQVAVDRALR
ALNEFTINGLSTNIGFLRALLSEPEFRNERINTGFIADHPNLLEAPAAADDAGKILNYLA
SVTVNQPNGPRPTNIRPSKKLPEANYGDLPRGSRDELLELGPKKWAEKLRNQTELGVTET
TFRDAHQSLLATRIRTNTLVAAAKHVGHLTPQLTSVEAWGGATYDVGMRFLHESPWMRLD
ELREAMPNVNIQMLLRGRNTVGYTPYPDSVTKAFVREAATSGIDIFRIFDALNDVSQMRP
AIDAVLETNTTVAEVAMAYSGNLMDPAEDLYTLDYYLNLAEEIVEAGAHVLAIKDMAGLM
RPAAAAKLVTALRERFDLPVHVHTHDTAGGQLATYLAAANAGADVVDVASAPLAGTTSQP
SMSALVAAFAQTERDTGIDLQAVFDMEPYWEAVRQVYAPFESGIPGPTGRVYKHEIPGGQ
LSNLRTQAKALGLEDRFELIEDYYAGVNEILGRPTKVTPSSKVVGDLALQLVGQGVSPQE
FAENPRKYDIPESVIGFLQGELGTPPGGWPLLRDQALKNRSEVDHTVKVPEELAVDLDSE
DHDTRRAALDKLLFPKQYAEYQEHLRTYGITDQLGDKTFFYGLEEGEETMIWYGEIDENR
PPLVVSLDAVGEPDEKGMRQVILTVNGQVRPITVRDESAESTVAEVEKADSSNPGHVAAP
FAGAVTVTVKEGDEVKAGDPVASIEAMKMEAAISATKDGTIERVAFTQPTKVEGGDLVVV
IA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggataatctcccgcttcacgacctgcccaccttcaacaagatcctggtggcc
aaccgtggcgaaattgccgtgcgtgccttccgtgcagcgtttgagaccggcgcgaagacc
gtcgccgtctacccccgcgaggaccgcaactccttccaccgcccgttcgcggacgaggct
gtccagattggcgagccgggtcagccggtgaaggcgtacctggacatcgacgagatcatc
cgcgccgcgaagcaaaccggcgcggacgcgatttacccgggctacgggttcctttccgag
cgcgccgacctggcgcgcgcgtgccgcgacaacggcattaagttcatcggccccagcccg
gaaactctggacctgaccggtgataagtccgccgccgtccaggccgcggagcgcgccggc
ctgccggtgctgaaggactccgagccgtccgacgacccgaagcagctggctgaatacgcc
aaggacttcgagttccccgtcttcgtcaaggcagtcgcaggcggcggcggccgtggtatg
cgctttattgagcgaccggaggacgtcgagaagcttgctgccgaagcctcccgtgaagcg
gaggccgcgttcggcgacccgaacgtctacatcgagcgcgccgtgatccgcccgcagcac
atcgaggtgcagatcatggccgactcccacggcaacgtcgtgcacctgtttgagcgcgac
tgttccgtgcagcgccgccaccagaaggtcgtggagatcgctccggcgcagcacatcacc
gaagagcagcgccagcgcatctgccaggacgcggtgaacttctgcaaggagatcaactac
gaaggcgccggcaccgtcgagttcctcgtggacgaggcgggcaaccacgtgttcattgag
atgaacccgcgcgtgcaggtcgagcacaccgtgacggaggaagtcaccggcatcgacatc
gtgaaaaaccagatgtacatcgccgctggcgcgcagctggagcagatccacctcacccag
gacctcatcgaggtcaacggcgccgccctgcagtgccgcatcaccaccgaggacccggcc
aacggcttccgcccggactccggcgtggtcaccggctacgcgtccccgggtggcgcgggt
gtgcgtctcgacggcaacgtggccgtcggcaccaccatcaccccgaacttcgactcgctg
ctggtgaagatgacctgccgcggccgcaacttccaggtggcggtggaccgcgcgctgcgc
gccctgaacgagttcaccatcaacggcctgtccaccaatatcggcttcctgcgtgccctg
ctgtccgagccggagttccgtaacgagcgcatcaacaccggcttcatcgcggaccacccg
aacctgctcgaggctccggccgccgccgacgacgccggcaagatcctcaactacctggcg
tcggtgacggtgaaccagcccaacggcccgcgcccgaccaacatccgtccgtcgaagaag
ctgccggaggcaaactacggcgacctgccgcgcggctcccgcgacgagctgctcgagctc
ggcccgaaaaagtgggcggagaagctgcgcaaccagaccgagctgggtgtcaccgagacc
accttccgcgacgcgcaccagtcgcttctggccacccgcatccgcaccaacaccctggtc
gcggcggcgaagcacgtcggccacctcaccccgcagctgacctccgtcgaggcctggggc
ggcgccacctacgacgtgggcatgcgctttttgcacgagtcgccctggatgcgcctggac
gagctgcgcgaggcaatgccgaacgtgaacatccagatgctgctgcgcggccgcaacacc
gtgggctacaccccgtacccggactccgtgaccaaggcattcgtgcgtgaggcagccacc
tccggcatcgacatcttccgcatcttcgacgcgctcaacgacgtctcccagatgcgcccc
gccatcgacgccgtgctggagaccaacaccaccgtcgccgaggtggccatggcctactcc
ggtaacctgatggacccggcggaagacctgtacacgctggactactacctcaacctcgcc
gaggagatcgtcgaggcgggcgcccacgtcctggccatcaaggacatggcgggcttgatg
cgcccggcagccgccgccaagctggtcaccgcgctgcgcgagcgcttcgacctgccggtg
cacgtgcacacccacgacaccgcgggcggacagctggccacctacctggcggccgcgaat
gccggcgccgacgtggtcgacgtggcgtctgcgccgctggcgggcaccacctcccagccg
tccatgtccgccctcgtcgccgcattcgcgcagacggagcgcgacaccggcattgacctg
caggccgtctttgacatggagccctactgggaggccgtgcgccaggtctacgccccgttc
gagtccggcatcccgggcccgaccggccgcgtgtacaagcacgagatcccgggcggccag
ctgtccaacctgcgcacgcaggccaaggcgctgggcctggaggaccgcttcgagctcatc
gaggactactacgccggcgtcaacgagatcctcggccgcccgaccaaggtcaccccgtcc
tccaaggtcgtcggcgacctggcgctgcagctggtgggccagggtgtcagcccgcaggag
ttcgcggagaacccgcgcaagtacgacatcccggaatctgtcatcggcttcctgcagggc
gagctgggcacgcctcctggcggctggccgctgctgcgcgaccaggcgcttaagaaccgc
tccgaggtcgaccacactgtcaaggtgccggaggaactggccgtggaccttgactccgag
gaccacgacacccgccgcgccgccctggacaagctgctcttcccgaagcagtacgcggag
taccaggagcacctgcgcacctacggcatcactgaccagctcggcgataagacgttcttc
tacggcctcgaagagggcgaggagaccatgatctggtacggcgagatcgacgagaaccgc
ccgccgctggtggtcagcctcgacgccgtgggtgagccggacgagaagggcatgcgccag
gtcatcctgactgtcaacggccaggttcgcccgatcaccgtgcgcgacgagtcagctgag
tccaccgtggccgaagtggagaaggccgattcctcgaacccgggccacgtggcagccccg
ttcgccggtgccgtcaccgtcaccgtcaaggagggcgacgaggtcaaagccggcgaccca
gtggcttcgatcgaggcgatgaagatggaggctgcgatctccgccacgaaggacggcacg
atcgagcgcgtcgcgttcacccagccgaccaaggtggaaggcggcgacctggtggtggtt
atcgcctaa
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