Corynebacterium afermentans subsp. lipophilum: CAFEL_02580
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Entry
CAFEL_02580 CDS
T09361
Symbol
rsgA
Name
(GenBank) Putative ribosome biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00730
Thiamine metabolism
cafe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CAFEL_02580 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cafe03009
]
CAFEL_02580 (rsgA)
Enzymes [BR:
cafe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
CAFEL_02580 (rsgA)
Ribosome biogenesis [BR:
cafe03009
]
Prokaryotic type
GTPases
CAFEL_02580 (rsgA)
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Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
GTP_EFTU
FeoB_N
AAA_16
AAA_29
NACHT
ATP-synt_ab
AAA_22
Roc
AAA_25
NTPase_1
AAA_33
Prot_ATP_ID_OB_C
MobB
nSTAND1
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WJY58301
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All DBs
Position
complement(540242..541267)
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AA seq
341 aa
AA seq
DB search
MGRSFADYDESDVRVRPGKGSRPRSKNRPTHDDAEFGLVVAKDRGRWGVVLDTAGTRLQC
TRARELKRTSIEVGDRVGVVGDTSGAKDTLARIVKREDRSSVLRRTADDTDPYERIIVAN
AQLLLIVVAAADPPPRTGFVERALIAAFVGGVTPVVCVTKTDLADPSDFERELEAMGVKV
LRTGVEDGVEQLRELIRGHVSALIGHSGVGKSTLVNRIVPDADRETGEVSGVGKGRHTST
QSVALEVPGGGWIIDTPGIRSFGLAHVSPEEIVDVFPDLEDAAQRCPRGCTHLGPPADPE
CAWDELDPASPVGRRAAAVRGLLAALHSNNDWELKQLDEDR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcagcttcgccgattacgacgagtccgatgtgcgcgtgcgccccggcaaaggc
tcgcgcccgcgctcgaagaaccgccccacgcacgacgacgccgagttcggcctcgtcgtg
gccaaagaccggggccgttggggtgtggtgctcgataccgccggcactcgcctgcagtgc
acccgcgcccgcgagctgaagcgcacctccatcgaggtgggcgaccgcgtcggcgtggtc
ggcgacacctcgggggcgaaagacaccctcgcccgcatcgtcaagcgcgaagatcgctcc
tcggtgctgcgccgcacggcggacgacaccgacccctacgaacgcatcatcgtggccaac
gcgcaactgctacttatcgtggtcgcggccgccgacccaccgccgcgcaccggctttgtc
gagcgcgccctcatcgccgcctttgtcggcggcgtgaccccggtggtgtgcgtaaccaag
accgatctggcagacccctcagacttcgagcgcgagctcgaggccatgggggtgaaggtg
ctgcgcaccggcgtcgaggacggcgtggagcagctgcgcgagcttatccgcggccacgtc
tccgccctcatcggccactccggtgtgggcaagtccaccctggtcaaccgcatcgtgccg
gacgcggaccgtgaaaccggcgaggtctccggcgtaggcaagggccggcacacctccacc
cagtccgtggccctcgaggtgcccggcggcgggtggatcatcgacacccccggcatccgc
tccttcggcctggcgcacgtttcccccgaagaaatcgtggacgtcttcccggacttggaa
gatgcggcgcagcgatgcccccgcggctgcacgcacttgggtcccccggcggatccggag
tgcgcctgggacgagctggacccggcctcccccgtcgggcgccgggccgccgcggtgcgg
ggccttttggcggccctgcactccaacaacgactgggagctaaagcagctcgacgaggac
cggtag
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