Corynebacterium afermentans subsp. lipophilum: CAFEL_03295
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Entry
CAFEL_03295 CDS
T09361
Symbol
icaR
Name
(GenBank) Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
Motif
Other DBs
NCBI-ProteinID:
WJY58439
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Position
complement(693974..694657)
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AA seq
227 aa
AA seq
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MAKPVGRPRKQSPRRRGATAREEILDAASELFTRKGFATTSTHDIADAVGMRQASLYYHF
PSKRDIFLTLLMGTIQPALALASDLAKTDESAAVKLWALVAAESRILLSSNWNIGRLYQL
PVLLSEEFTEYHEARQELEGIFRKLSGQIVGEDDPRIDLPFHMTLAAIEMRDNTGTAPYP
LVDDALPAPAVTIADAVLDVLHTDLPERRTERMLELVDLVSRKNEQD
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccggtcggacggccacgcaagcaaagcccccgccgcagaggcgccaccgca
cgcgaggagatcctcgacgccgcctccgaactgttcacccgcaaaggtttcgccaccacc
tccacccatgacatcgcggacgcggtgggcatgcgccaagcctcgctgtactaccacttc
ccctccaagcgcgacatcttcctcacgctgctgatgggcacgatccagccggccctcgcg
ctcgcgtcggatctggccaagaccgacgagtcggcggcggtgaagctgtgggcgctggtg
gccgcggagtcgcgcatcctgctgtcctcgaattggaacatcggcaggctctatcagctg
ccggtgctgttgtccgaagagttcaccgagtaccacgaggcgcgacaggagttagagggg
atcttccgcaaactatcggggcagatcgtcggcgaggacgacccgcgcatcgacctgccg
ttccacatgacgctcgcggccatcgagatgcgcgacaacactggcaccgcgccctacccg
cttgtcgacgatgcgctgcccgcccccgccgtcaccatcgccgacgccgtgctggacgtc
ctccacacggacctgccggaacgccgcacggagcgcatgctcgagctggtggacttagtc
tcccgcaagaacgagcaggactag
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