Corynebacterium afermentans subsp. lipophilum: CAFEL_03825
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Entry
CAFEL_03825 CDS
T09361
Symbol
glyA1
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00260
Glycine, serine and threonine metabolism
cafe00460
Cyanoamino acid metabolism
cafe00630
Glyoxylate and dicarboxylate metabolism
cafe00670
One carbon pool by folate
cafe00680
Methane metabolism
cafe01100
Metabolic pathways
cafe01110
Biosynthesis of secondary metabolites
cafe01120
Microbial metabolism in diverse environments
cafe01200
Carbon metabolism
cafe01230
Biosynthesis of amino acids
cafe01240
Biosynthesis of cofactors
cafe04981
Folate transport and metabolism
Module
cafe_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CAFEL_03825 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
CAFEL_03825 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CAFEL_03825 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CAFEL_03825 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CAFEL_03825 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CAFEL_03825 (glyA1)
Enzymes [BR:
cafe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CAFEL_03825 (glyA1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
WJY58542
LinkDB
All DBs
Position
794016..795308
Genome browser
AA seq
430 aa
AA seq
DB search
MSEDLRYQDLATYDPEVHAAIVDELARQRDTLEMIASENFVPRSVLQAQGSVLTNKYAEG
YPGRRYYGGCEHVDVIEDLARDRAKEVFGAQYANVQPHSGAQANAAVLMALAEPGDTILG
LDLAHGGHLTHGMKINFSGRLYNVEAYQVEEDTHQIDMAKLREQAREVKPKVIIAGWSAY
PRHEDFAEFRSIADEVGAYLWVDMAHFAGLVAAGLHPNPVPHAHVVSSTVHKTLGGPRSG
FILTNDLELHKKLNSAVFPGQQGGPLMHVVAAKATAFKIAGSQEFKDRQQRTLDGAKVLA
ERLLADDAREAGVSVVSGGTEVHLVLVDLRNSPMDGQQAEDLLHSVGITVNRNAVPFDPR
PPKVTSGLRIGTSALATRGFGEEDFREVAEIIAETLIKAENADVDALRGRVEALARKYPL
YPDLEDWKML
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaagacctccgttaccaggatctggccacctacgatcccgaggtgcacgccgca
attgtggacgagctggcgcgccagcgcgacaccttggagatgatcgcctccgagaacttt
gtgccccgctctgtgctgcaggcgcagggttcggtgctgaccaacaagtacgccgagggt
tacccgggccgccgctactacggcggctgtgagcacgtggacgtgatcgaggacttggcg
cgcgaccgcgccaaggaggtcttcggcgcccagtacgcgaacgtgcagccgcactcgggt
gcgcaggccaacgccgcggtgctcatggcgctggcggagccgggcgacaccatcttgggc
ctggacctggcgcacggcggccacctcacccacggcatgaagatcaacttctccggccgc
ctctacaacgtggaggcgtaccaggtggaggaggacacccaccagatcgacatggccaag
ctgcgcgagcaggcccgcgaggtcaagccgaaggtgatcatcgccggctggtccgcgtac
ccgcgccacgaggacttcgcggagttccgctccatcgccgacgaggtcggcgcttacctg
tgggtggacatggcccacttcgcaggcctggtcgccgccggtctgcacccgaacccggtc
ccgcacgcgcatgtggtgtcctccacggtgcacaagactctcggcggcccgcgctccggt
ttcatcctcaccaacgacctggagctgcacaagaagctcaactccgcggttttcccgggc
cagcagggtggcccgctgatgcacgtcgtggctgcgaaggcgaccgcgttcaagatcgcg
gggagccaggagttcaaggaccgtcagcagcgcaccctcgacggcgcgaaggtgctggcg
gagcgtctgcttgccgacgacgcacgcgaggccggcgtttccgtcgtctccggcggcacc
gaggtgcacctcgtgctggtggacctgcgtaactcgccgatggacgggcagcaggccgag
gacttgctgcactcggtgggcatcaccgtcaaccgcaacgcggtgccgttcgacccgcgc
ccgccgaaggtgacctccggcctgcgcatcggcacttccgcgctggccacccgcggcttc
ggcgaggaggatttccgcgaggtcgccgagatcatcgcggagacgttgatcaaggccgag
aatgccgacgttgatgcgctgcgcggccgcgttgaggccctggcgcgcaagtacccgctc
tacccggacctcgaggattggaagatgctctag
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