Corynebacterium afermentans subsp. lipophilum: CAFEL_04465
Help
Entry
CAFEL_04465 CDS
T09361
Name
(GenBank) ATP-dependent helicase HepA
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
WJY58670
LinkDB
All DBs
Position
926685..929789
Genome browser
AA seq
1034 aa
AA seq
DB search
MPEYLLHGLWLPESGLSVWVERVQGHRIVTMDDVPPGTFPPIVHSLLDGQRFHHFHTLIL
QTPKGRHVRLKAPLAQFAPEDAVRFLDSLSHLDEESPAATPAQREAVAPDMYWILRMYRG
LTQFVRAGRVSINVPYHDGLWYAQWQLGTGLEERSWLAEMIAASPGVLTVNNANLSEDCA
QTFTHWIASARLQGAAAKAPTRPYPWHDFVKSLLYSMPLRRGGAVLARQIGDWNGTITAV
NLQLVFIVESPSEAEESGPDTLWPVRVQVRSSSDSPRPVRLGDYDSNTADVLRGQLDHAI
ELTSLVDPAKYGRFRSAVDHGFDPNAGDWDLYLNGDEIVKFVRESASYLRANGFVVLLPR
AWATAETASKLKVSEHQDPHDSSTVTMMGFDTLVKYDWRLSVGGVELSDEEMAQLVKSKS
GLIKLRGEWVLADSREVAKTAKYLEKLHDTSLETAMSEAEAAIKRARIAQAAGSDDAEEL
QRIADEAQAEYERLKAAEGEGVVSAAELRQLALEAGADSPIEFTGSRWFTSLVGGTDRPA
PERVDIPDTVNAELREYQRRGVDWLYFMSRNNLGAVLADDMGLGKTLQMLTLLAVEQAEG
TRRGPSLIVAPTSVVNNWAREAARFVPGMRVRVHHGAGRLKGDDLFEAADNSDIVITSYG
TAARDAKDLAAVQWDHVVLDEAQAIKNAGTQSSKSVRAIPARHRIALTGTPIENKLFELR
SILDFVNPGMLGSQSFFRNHFAKAIESRRDPELADEMGERLQRLTAPFILRRLKTDTAII
SDLPDKAEHVIAVDMTPEQAALYKALVDSTQAELQERKGMARKGLVLATITRIKQVCNHP
AHFLGDGSAVTDKGHHRSGKVEKLMELLEEAAASEQRVLIFTQYKAFGDILKPYLSERLG
EDVPFLHGGVGKSARDAMVERFQQPDGPRAMILSLKAGGTGLNLTAASMVIHLDRWWNPA
VENQATDRAFRIGQEKNVTVYKIITRGTMEESIQDILDGKTQLAGAVVGQGEGWITELGT
EELAQLISYRGQND
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaataccttctccatggcctgtggctccccgagtccgggctttcggtgtgggtt
gagcgcgtacagggccaccggattgtgaccatggatgacgtgccgcccggcacgtttccg
ccgatcgtgcattcgcttttggacggccaaaggttccaccacttccataccctcatcctg
caaaccccgaagggccgccacgtccgcttgaaagcgccgttggctcagtttgcgcccgag
gacgcggtgcgctttttggacagcctgtcgcacctggacgaggagtcgccggcggccacg
cctgcccagcgcgaggcggtggcgccggacatgtactggatcctgcgcatgtataggggc
ctgacccagttcgtgcgcgcgggacgcgtgagcatcaacgtgccgtaccacgacggactg
tggtacgcgcagtggcagctgggcaccggtttagaggagcgcagctggctggcggagatg
atcgccgcctcgccgggcgtgctcacggtgaacaacgcgaacttgagcgaggattgtgcg
cagacgttcacgcactggatcgcgtcggcacgcttgcagggcgcggcggcgaaggcgccg
accaggccgtacccgtggcacgattttgtgaagtcgctgctctacagcatgccgttgcgc
cgcggcggggcggtgctggcccggcagataggggattggaacggcacgatcacggcggtg
aacctgcagctggtgttcatcgtggagtcgccgagcgaggcggaggagtcgggcccggac
acgctgtggccggtgcgtgtgcaggtgcgctcgagctcggattcgccgcggccagtgcgg
ctgggggattacgactcgaatacggcggacgtgttgcgcggtcagctcgaccatgcaatc
gagttgacctcgctggtggatccggcgaagtacggccggttccgttccgcggtggaccac
ggcttcgacccgaacgcgggcgactgggacctgtatttgaacggcgacgaaattgtgaag
ttcgtccgcgagagcgcgtcgtaccttcgggcgaacggcttcgtggtgcttttgcctcgc
gcgtgggcgactgcggagacggcctcgaagctgaaagtcagcgagcaccaggacccgcac
gattcctccaccgtgaccatgatgggcttcgacaccctggtcaagtacgactggcggctg
tccgtcggcggcgtggagctttcggacgaagagatggcgcagctggtcaaatccaagtcc
ggcctgatcaagctccgcggcgagtgggtcctggcggatagccgcgaggtggccaagacc
gcgaagtacctggagaagctgcacgacacctccctggaaaccgccatgagtgaggcggag
gccgccatcaagcgcgcccgaatcgcccaggccgccggctccgatgacgctgaggagctg
cagcgcatcgccgatgaggcgcaggcggagtacgagcggctcaaggccgccgagggcgag
ggcgtggtctccgccgcggagctgcgccagctcgcgctggaggcgggcgcggacagcccg
atcgagttcaccggctcgcgctggtttacctcgctggtcggcggcacggaccgcccggcg
ccggagcgggtggacatccccgacaccgtcaacgccgagctgcgcgagtaccagcgccgc
ggcgtggactggctgtactttatgtcccgcaacaacttgggggcggtgcttgcggacgac
atgggcctgggcaagaccctgcaaatgctcaccctgctcgcggtggaacaggcggagggc
acgcggcgcggcccgtcgctgatcgtcgccccgacgtcggtggtgaacaactgggcgcgc
gaggcggcccgcttcgtgccgggcatgcgcgtgcgcgtccaccacggcgcgggcaggctc
aagggcgacgatctgtttgaggcagccgacaactccgacatcgtcatcacgtcctacggc
accgccgcgcgcgacgccaaggatctggcggcggtgcagtgggatcacgtggtgttggac
gaggcgcaggcgatcaagaacgcgggcacgcagtcgtcgaaaagcgtccgtgcgattccc
gcacgccaccgcatcgccctgaccggcacgccgattgaaaacaagctctttgagctgcgc
agcatcctggattttgtcaacccgggcatgctgggatcgcagagtttcttccgcaaccac
ttcgccaaagccatcgagtcgcgcagggatcctgagctagcggacgagatgggggagcgg
ctgcagcgcctcaccgcgccgtttatcctgcgccgcctgaaaacggacacggcgatcatt
tcggacctgccggacaaggccgagcacgtcatcgccgtggacatgaccccggagcaagcc
gcgctgtacaaggcgctggtggacagcacgcaggcagagcttcaggagcgcaagggcatg
gcacgcaaggggctcgtgctggccacgatcacccgcatcaagcaggtgtgcaaccacccg
gcgcactttcttggcgacggctccgcggtcaccgacaaaggccaccaccgctccggcaag
gtggaaaaactcatggagcttctggaggaagccgccgcgtccgagcagcgtgtgctgatt
ttcacgcagtacaaggcgttcggcgacatcttgaagccctacctttcggagcgcctgggc
gaggacgtgccgttcctccacggcggcgtgggcaaatccgcgcgcgacgcgatggtggag
cgcttccagcagccggacgggccccgcgcgatgatcctcagcctgaaggccggcggcacc
ggtttgaacttgaccgcggcatccatggtcatccacttggaccgctggtggaacccggcg
gtggaaaaccaggccacggaccgcgcgttccgcatcgggcaggagaagaacgtcacggtg
tacaagatcatcacccgcggcacgatggaggagtccatccaggacattctggacggcaag
acccagctcgccggcgccgttgtgggccagggcgagggctggatcaccgagctgggcacc
gaggagctcgcccaattgatcagctacagggggcaaaatgactga
DBGET
integrated database retrieval system
