Corynebacterium afermentans subsp. lipophilum: CAFEL_04735
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Entry
CAFEL_04735 CDS
T09361
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe03030
DNA replication
cafe03430
Mismatch repair
cafe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAFEL_04735
03430 Mismatch repair
CAFEL_04735
03440 Homologous recombination
CAFEL_04735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cafe03032
]
CAFEL_04735
03400 DNA repair and recombination proteins [BR:
cafe03400
]
CAFEL_04735
Enzymes [BR:
cafe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAFEL_04735
DNA replication proteins [BR:
cafe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAFEL_04735
DNA repair and recombination proteins [BR:
cafe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAFEL_04735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WJY58723
LinkDB
All DBs
Position
complement(984265..984948)
Genome browser
AA seq
227 aa
AA seq
DB search
MSLMATFDASRMLSFDLETTSANPREARVVTSALVRIDGSEVDANETLADPGVEIPEEAA
KVHGITTERARAEGRDHDEVVRETVEAIKKGWEDGLTLVVFNAPYDLTVLRQLTGDFTVT
GPVFDPLLIDRAKDRYRKGPRNLTSMCEHYGVRLDNAHEATADAFAAARVAWMQVRKLYP
ELSQMDTGELMEYQAVEYFTLQEDRKRYFESQGRDASNVLPGWPMLG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcatggccactttcgacgcctcccgcatgctctccttcgacctggagaccacc
tccgccaacccgcgcgaggcccgtgtggtcacctctgcgctcgtgcgtatcgacggctcc
gaggtcgacgccaacgaaaccctcgccgaccccggagtggagatcccggaagaggccgcg
aaggtgcacggcatcaccacggaaagggcccgcgcggaggggcgcgaccacgacgaggtg
gtgcgcgagaccgtcgaggcgatcaagaagggctgggaggacggcctgactctggtggtg
ttcaacgccccctacgacctgacggtgctgcgccagctcaccggggacttcacggtcacc
ggcccggtgtttgaccccctgctcatcgaccgcgccaaggaccgttaccgcaaaggcccg
cgcaatctaacctccatgtgcgagcactacggggtgcggctagacaacgcgcatgaggcc
accgcggacgcgttcgccgcagcccgcgtggcgtggatgcaggtgcgcaagctctacccg
gagctttcccagatggacaccggcgagctcatggagtaccaggcggtggagtacttcacg
ctgcaggaggaccggaagcgctacttcgagtcccagggccgcgacgcttcgaacgtgctg
cccggctggcccatgctgggctag
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