Corynebacterium afermentans subsp. lipophilum: CAFEL_04820
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Entry
CAFEL_04820 CDS
T09361
Symbol
gatB
Name
(GenBank) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00970
Aminoacyl-tRNA biosynthesis
cafe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CAFEL_04820 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cafe03029
]
CAFEL_04820 (gatB)
Enzymes [BR:
cafe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
CAFEL_04820 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
CAFEL_04820 (gatB)
Mitochondrial biogenesis [BR:
cafe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CAFEL_04820 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
YqeY
Motif
Other DBs
NCBI-ProteinID:
WJY58740
LinkDB
All DBs
Position
999739..1001241
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AA seq
500 aa
AA seq
DB search
MTAYDLMDYDEVLEKYDPVMGLEVHVELATETKMFSTSSAHFGAEPNTNIDPVSLGLPGA
LPVVNAKGVEWAIKIGLALNCKIAESSRFARKNYFYPDQPKNYQISQYDEPIAYDGYLDV
VLEDGTEWRVEIERAHMEEDTGKLTHLGSASGRITGATASLVDCNRAGIPLIEIVTKPII
GAGERAPEVAKAYVGALRELVKALGVSDARMDQGSMRCDANVSLRPVGQEEFGTRTETKN
INSLKSVEQAVRFEMQRQAAVLQDGGEVVQETRHYQEKDGSTSKGRPKEEASDYRYFNDP
DLPPVIAKPEWVEEIRATLPELPWVRRARIQEEWQLPEKEFRDLVNAGALDLIVDTVEAG
ATPDEARAWWVSYINGKANEAGKDLDALGVTPADVARVVELVKEGKLTTKLGRQAIDGVI
AGEGSVDEVVAARGLEVVRDDGAIEKAVDEALAANPDIVEKYRAGNKKVTGAIVGAVMKA
TQGKADPGQVNQLIAKKLAE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgtacgacctgatggattacgacgaagtactcgaaaagtacgaccccgtgatg
ggccttgaggtgcacgtcgagctcgccaccgagacgaagatgttctccacctcctccgca
cacttcggcgcggagccgaacacgaacatcgacccggtctcgctcgggcttcccggtgcg
ctgccggtggtcaacgccaagggtgtggagtgggccatcaagatcggcctggcgctgaac
tgcaagatcgccgagtcctcgcggttcgcgcgcaagaactatttctacccggatcagccg
aagaactaccagatctcccagtacgacgagccgatcgcctacgacggctacctggacgtc
gtgctcgaggacggcaccgagtggcgcgtggagatcgagcgcgcgcacatggaggaagac
accggcaagctcacccacctaggctccgcctccggccgcatcaccggcgccaccgcgtcg
ctggtggactgcaaccgcgcgggcatcccgctgatcgagatcgtgaccaagccgatcatc
ggcgccggcgagcgcgcacccgaggtggccaaggcctacgtcggcgcactgcgcgagctg
gtcaaggccctcggcgtctccgacgcgcgcatggaccagggcagcatgcgttgcgacgcc
aacgtgtccctgcgcccggttggccaggaggaattcggcacccgcaccgagacgaagaac
atcaactccctgaagtccgtcgagcaggccgtgcgctttgagatgcagcgccaggccgcg
gtcctgcaggacggcggggaagtggtccaggagacccgccactaccaggagaaggacggc
tccacctccaagggccgcccgaaggaagaggcgagcgactaccgctatttcaacgatcca
gatcttccgccggtgattgccaagccggagtgggtcgaggaaatccgcgccaccctgcca
gagctgccgtgggtgcgccgtgcgcgcatccaggaggagtggcagctgccggagaaggag
ttccgcgacctggtcaacgccggcgcgctcgacctgatcgtggacaccgtcgaggctggc
gccacgcccgatgaggcccgcgcatggtgggtctcctacatcaacggcaaggccaacgag
gccggcaaggacctcgacgccctcggtgtcaccccggccgacgtcgcccgcgtggtggag
ctggtcaaggaaggcaagctgaccaccaagctgggccgccaggccatcgacggcgtcatc
gctggcgaaggttctgtcgacgaggtcgtcgccgcccgcggcctggaggtcgtgcgcgat
gacggcgcgattgagaaggccgtcgacgaagcgctggccgccaacccggacatcgtggag
aagtaccgcgccggcaacaagaaggtcaccggcgccattgtcggtgcggtgatgaaggcg
acccagggcaaggccgacccggggcaggtcaaccagctcatcgcgaagaagctcgcggag
tag
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