Corynebacterium afermentans subsp. lipophilum: CAFEL_05030
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Entry
CAFEL_05030 CDS
T09361
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00470
D-Amino acid metabolism
cafe00550
Peptidoglycan biosynthesis
cafe01100
Metabolic pathways
cafe01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CAFEL_05030 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CAFEL_05030 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CAFEL_05030 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cafe01011
]
CAFEL_05030 (ddl)
Enzymes [BR:
cafe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CAFEL_05030 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
cafe01011
]
Precursor biosynthesis
Amino acid ligase
CAFEL_05030 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATPgrasp_ST
RimK
ATP-grasp_3
CPSase_L_D2
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
WJY58779
LinkDB
All DBs
Position
1050333..1051343
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AA seq
336 aa
AA seq
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MSTEHSISCISADSVMSHMPAEYEVVPIGITQEGIWVEGVANPAKGAELPVVKPGREVAL
SLNPQRKGLLYDVTSGETITTIDAVFPVLHGKYGEDGTVQGLLEMAGVPYVGPGVLASAC
GMDKEYTKKLVAAAGIPVTREVILNGARELTEAERSHLGLPVFVKPANGGSSIGVSKVTS
WDALPDAVSLALESDGKVIVEAELVGDEVEVGVLERPDGTIAASVPAKLNGTEDSAEGFY
GFETKYLEEGVTATIPAPYSDELIAQLQDMAVTCFHALDCKSLARVDFFVTDNGPVLNEI
NTMPGFTAISMYPQVWAAAGVDYPQLLDTLIRTALR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgagcactcgatttcctgcatctccgccgactcggtcatgtcgcacatgccc
gccgagtacgaggtggttcccatcggcatcacgcaggaaggtatctgggttgagggtgtg
gcgaatccggctaaaggggcggagcttcccgtcgtcaagcctgggcgcgaggttgcgctc
tcgttgaacccgcagcgcaagggattgctttacgacgtcacctccggcgagaccatcacc
accatcgacgccgtcttcccggtgctgcacggcaaatacggcgaggacggcacggtccaa
ggtctgctggagatggccggggtgccgtacgtcggcccgggcgtgctggcgtccgcgtgc
gggatggacaaggagtacacgaagaagctggtggcggcggccgggattcctgtcacgcgc
gaggtgatcctgaacggcgcgcgcgagctgaccgaggcggagcgctcgcatcttggtctg
cccgtgtttgtgaagccggccaacggcgggtcttctatcggcgtgtccaaggtgaccagc
tgggatgcgctgcccgacgcggtgtcgctcgcgctcgagtccgacggcaaggtcatcgtg
gaggccgagttggtcggcgacgaggtggaagtcggcgtgcttgagcgccccgacggcacc
atcgccgcatccgtgcccgccaaactcaacggcaccgaggactccgctgagggcttctac
ggctttgagacgaagtacctcgaagaaggcgtcactgccaccatcccggcgccgtactcc
gacgagctgatcgcccagctacaggacatggcggtgacgtgcttccatgcgctggactgc
aagtcgctcgcgcgcgtggacttcttcgtcaccgacaacgggccggtgctcaacgagatc
aacactatgcccggcttcaccgccatttcgatgtacccgcaggtgtgggccgccgcgggc
gtggactacccgcagctgctggacaccctgatccgaaccgcgctgcgctag
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