Corynebacterium afermentans subsp. lipophilum: CAFEL_05145
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Entry
CAFEL_05145 CDS
T09361
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CAFEL_05145 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cafe03011
]
CAFEL_05145 (rpsA)
Ribosome [BR:
cafe03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CAFEL_05145 (rpsA)
Bacteria
CAFEL_05145 (rpsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
DUF2187
EFTUD2
Motif
Other DBs
NCBI-ProteinID:
WJY58801
LinkDB
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Position
1075969..1077432
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AA seq
487 aa
AA seq
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MRTSNAPQVAINDIGGPEEFLAAVDETIKYFNDGDIVTGTVVKVDHDEVLLDIGYKTEGI
ILTRELSIKHDVDPEDVVEVGDEIDALVLTKEDKEGRLMLSKKRAQYERAWGTIEELQAN
DQPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLDPYIGQELEAKIIELDKHRNN
VVLSRRAYLEETQSAVRSDFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW
KHIDHPSEVVAVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAVGQIVPGKVT
KLVPFGAFVRVEEGIEGLVHISELAQRHVEVPDQVVNVGEEVMVKVIDIDLDRRRISLSL
KQADEDYVEEFDPSRYGMADSYDEQGNYIFPEGFDPETNEWMEGYDEARQAWEARYAEAE
RRHQAHTAQIERHRAAAAEAAEQEGEQANYSSESAAAAPAADQAEENIGSLASDEQLAAL
RDKLAGN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacttccaacgcaccccaggtagccatcaacgacatcggtggccctgaggaattc
ctcgccgcagtcgacgagaccatcaagtacttcaacgatggcgacatcgtcaccggcacc
gtggtcaaggtcgaccacgacgaggtcctgctcgacatcggctacaagaccgagggcatc
atcctcacccgcgagctgtccatcaagcacgacgtcgacccggaagacgtggtcgaggtc
ggcgatgagatcgacgcacttgtcctgaccaaggaggacaaggaaggccgcctgatgctg
tccaagaagcgcgctcagtacgagcgtgcttggggcaccatcgaggagctgcaggccaac
gaccagccggttaccggtaccgtcatcgaggttgtcaagggcggcctcatcctcgacatc
ggcctgcgcggcttcctgccggcatcgctggtcgagatgcgtcgcgtccgcgacctggat
ccgtacatcggccaggagctcgaggcgaagatcatcgagctggacaagcaccgcaacaac
gtggtcctgtcccgccgcgcttacctggaggagacccagtccgcggtccgctccgacttc
ctgcaccagctgcagaagggccaggtccgcaagggtgtcgtgtcctccatcgtcaacttc
ggtgcgttcgtcgatctcggcggcgtcgacggcctggtgcacgtctctgagctgtcctgg
aagcacatcgaccacccgtccgaggttgtcgccgtgggcgacgaggtcactgtcgaggtg
ctcgacgtcgatctcgaccgcgagcgtgtttccctgtcgctgaaggcgacccaggaggat
ccgtggcgcgtcttcgcccgcacccacgctgtgggccagatcgtcccgggcaaggtcacc
aagctcgtcccgttcggcgcgttcgtccgcgtcgaggagggcatcgagggcctcgtccac
atctccgagctggctcagcgccacgtggaggtcccggaccaggtcgtcaacgtcggcgaa
gaggtcatggtcaaggtcatcgacatcgacctggaccgtcgccgcatctccctgtccctc
aagcaggctgacgaggactacgtcgaggagttcgatccgtcccgctacggcatggccgac
tcctacgacgagcagggcaactacatcttcccggagggcttcgacccggagaccaacgag
tggatggaaggctacgacgaggctcgtcaggcatgggaggcacgctacgccgaggcagag
cgtcgccaccaggcccacaccgcccagatcgagcgtcaccgcgccgctgccgccgaggcc
gcggagcaggagggcgagcaggccaactactcctccgagtctgcagctgcagctccggca
gctgaccaggctgaggagaacatcggctccctcgcctccgacgagcagctcgcggctctg
cgcgacaagctcgctggcaactag
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