Corynebacterium afermentans subsp. lipophilum: CAFEL_05515
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Entry
CAFEL_05515 CDS
T09361
Symbol
gndA
Name
(GenBank) 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating
KO
K00033
6-phosphogluconate dehydrogenase [EC:
1.1.1.44
1.1.1.343
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00030
Pentose phosphate pathway
cafe00480
Glutathione metabolism
cafe01100
Metabolic pathways
cafe01110
Biosynthesis of secondary metabolites
cafe01120
Microbial metabolism in diverse environments
cafe01200
Carbon metabolism
Module
cafe_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
cafe_M00006
Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
CAFEL_05515 (gndA)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CAFEL_05515 (gndA)
Enzymes [BR:
cafe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.44 phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating)
CAFEL_05515 (gndA)
1.1.1.343 phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating)
CAFEL_05515 (gndA)
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Gene cluster
GFIT
Motif
Pfam:
6PGD
NAD_binding_2
NAD_binding_11
F420_oxidored
Shikimate_DH
Epimerase
DUF5718
adh_short
HEM4
NAD_binding_10
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
WJY58871
LinkDB
All DBs
Position
complement(1155440..1156858)
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AA seq
472 aa
AA seq
DB search
MAVMGSNLARNFASKGHTVAIFNRSPEKTRAVIDKFGHEGDFIPAETIEEFVASLQRPRK
AVIMVQAGDATDAVIAQLVEAMDEGDIIIDGGNALFTDTIRREREVAAAGRHFVGAGISG
GEEGALRGPSIMPGGPAESWETLGPLLEDISAKVDGTPCVTHIGPDGAGHFVKMVHNGIE
YADMQVIGEAYHLLRYAAGLEPAEIADIFTEWNKGDLDSYLIEITAEVLRQVDARTGKPF
IDIIVDAAGQKGTGRWTVKEALDLGVPTTAIGEAVFARALSSALAQREAAQEVGLPAGET
TTLDTVGVDKQSFIEDVRRALYASKLVAYAQGFDEINAGSQEHNWDIKPGDLARIWRGGC
IIRAKFLDRITEAYEKDPELPSLLMDPYFKGELEKGLVDSWRRVVVTATQLGLPVPVFAS
SLSYYDSLRTKRLPAALIQGQRDFFGAHTYKRVDAEGTFHTTWSGEREELSY
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgatgggttccaacctcgcccgcaacttcgcctccaagggccacacggtggct
attttcaaccgctccccggaaaagacccgtgcggtgatcgacaagttcggccacgagggc
gacttcattcccgcggagacgatcgaggagtttgtcgcgtcgctccagcgcccgcgcaag
gccgtgatcatggtccaggccggcgacgccacggatgcggtgatcgcccagctcgttgag
gcgatggatgagggcgacatcattatcgacggcggcaatgccctgttcaccgacaccatc
cgccgcgaacgcgaggtcgccgctgccggccgccacttcgtcggcgccggcatctccggc
ggcgaggagggcgcgctgcgcgggccgtccatcatgcccggtggtccggcggagtcctgg
gagaccctcgggccgctgttggaggacatttccgcgaaggtggacggcaccccgtgcgtg
acccacatcggacccgacggcgccgggcactttgtcaagatggtgcacaacggcatcgag
tacgccgacatgcaggtcatcggtgaggcctaccacctactgcgttatgcggcgggcctt
gagcccgcagagatcgccgacatcttcacggagtggaataagggcgacctggattcctac
ctcatcgaaatcaccgctgaggtgctgcgccaggtggacgcgcggaccggcaagccattc
atcgacatcatcgtggacgcggccggccagaagggcaccggccgctggacggtcaaggag
gccctggacctcggcgtgcccaccactgccatcggcgaggccgtcttcgcccgcgcgttg
tcttctgcccttgcgcagcgcgaagcggcccaggaggtcggtttgccggcgggtgagacg
acgacgttggacaccgtaggcgtcgataagcaatcgttcattgaggacgtgcgacgcgcg
ctctacgcctccaagctggtggcgtacgcgcagggcttcgacgagatcaacgccggctcc
caggaacacaactgggacatcaagccgggtgatctggcgcgtatttggcgcggcggctgc
atcatccgcgcgaagttcctggaccgcatcaccgaggcctacgagaaagacccggagctg
ccgtcgctgctgatggacccgtatttcaagggcgagctggaaaaggggctggtggattcc
tggcgccgcgtggtcgtcaccgcgacccagctgggccttcctgtgccggtgttcgcgtcc
tcgctgtcctactacgactcgctgcgcaccaagcgcctgccggctgccctgattcagggc
cagcgcgacttcttcggcgcccacacgtacaagcgcgtggacgcggagggcacgttccac
accacctggtccggcgagcgagaggaactgagctactag
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