Corynebacterium afermentans subsp. lipophilum: CAFEL_05625
Help
Entry
CAFEL_05625 CDS
T09361
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cafe03051
]
CAFEL_05625 (pafA)
Enzymes [BR:
cafe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
CAFEL_05625 (pafA)
Proteasome [BR:
cafe03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CAFEL_05625 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WJY58893
LinkDB
All DBs
Position
complement(1178369..1179736)
Genome browser
AA seq
455 aa
AA seq
DB search
MGVETEFGVAAYDGSRQVLTPEEVARYLFRPVVAQHRSSNVFTANASRLYLDVGSHPEYA
TAECDSLSQLLAYDKAGERIFHQLSQQCDEALRNDGFAGSTYLFKNNVDSRGNSYGAHEN
YLISRELALKSFGQQLLPFLITRQLICGAGKIAGDKFVISQRADQVWEGVSSATTRTRPI
INTRDEPHGDSHRFRRMHVIVGDSNMSEPTFALKVGSMLLVIEMLEAGFDLPDMELADPI
AHIRDIAADPTGATELTLAAGGTVTALEVQQRTLEAAKRWLEQRPDEGTPNEEMARVVDL
WSRVLDAIATQDFSGVDTEIDWVIKRKLLTQFKDRLGCGWDHPKLAQIDLTYHDINPERG
LFYVLERKGLAARWIDNAAIEKAVDNPPATTRAAVRGEFLTAVRERGLAHNVDWVHLKVN
RPEPRTVELQDPFANADDAAADLISWVRAQETAEG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggaaacggagttcggcgtggccgcctacgacggctcacgccaggtgctcacg
cccgaggaggtcgcgcgctacctgtttcgcccggtggtcgcgcagcaccgcagctccaac
gtgttcaccgccaacgcttcgcgcctgtacttggatgtgggatcgcaccctgagtacgca
accgcggagtgcgactcgctgagccaactgctcgcctacgacaaggcgggagagcggatc
ttccaccagttgtcgcagcagtgcgacgaggcgctgcgtaacgacggcttcgcgggctcg
acatacctgttcaaaaacaacgtggattcgcgcggcaactcctacggcgcgcacgagaac
tacctgatcagccgcgagctcgcgctgaagtccttcggccaacagttgctgccgtttctg
atcacgcgccagctgatctgtggcgcgggcaagatcgcgggggataaattcgtcatctcc
cagcgcgcagaccaggtgtgggagggcgtttcgtccgccaccacgcgtaccagaccgatc
atcaatacccgcgacgaaccccacggagattcccaccgcttccgccgcatgcacgtgatc
gtgggagattccaacatgtccgagcccaccttcgcgctgaaggtcggctcgatgctgctg
gttatcgagatgctggaggccggcttcgacctgccggacatggagctggcggatccgatt
gcgcacatccgcgacatcgccgccgaccccacaggcgccaccgaactcacccttgcagcg
ggcggcaccgtaacggctctcgaggtgcagcagcgcaccctcgaggcggcgaagcgctgg
cttgagcaacgcccggacgagggcacgccgaatgaggagatggcgcgcgtggtggacctg
tggtcccgggtgctcgacgccattgccacgcaggacttctctggcgtggacaccgagatc
gattgggtgatcaagcgcaaactgctcacccagttcaaagaccggctcggctgcggctgg
gaccacccgaagctcgcccagatcgatctgacgtaccacgacatcaaccccgaacgcggg
ctgttctacgtgctggagcgcaaggggctcgcagcgcggtggatcgacaacgccgcgatt
gagaaagcggtggacaacccgccagcgactacgcgagccgctgttcgcggtgagtttctc
accgccgtgcgcgagcggggccttgcgcataatgtcgactgggtgcacttgaaggtcaac
cgcccggaaccccgcaccgtggagctgcaggacccgttcgccaacgcggacgatgccgca
gccgacctaatcagctgggtgcgggcgcaagaaactgcagaagggtag
DBGET
integrated database retrieval system
