Corynebacterium afermentans subsp. lipophilum: CAFEL_05645
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Entry
CAFEL_05645 CDS
T09361
Symbol
pdxS
Name
(GenBank) Pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00750
Vitamin B6 metabolism
cafe01100
Metabolic pathways
cafe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
CAFEL_05645 (pdxS)
Enzymes [BR:
cafe01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
CAFEL_05645 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
OMPdecase
TetR_C_27
IGPS
TIM
DHO_dh
PBECR3
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
WJY58897
LinkDB
All DBs
Position
complement(1183122..1183997)
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AA seq
291 aa
AA seq
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MPQAEELNQKFIGGVIMDVVTPEQAKIAEDAGASAVMALERVPADIRAQGGVARMSDPDL
IEGIIDTVNIPVMAKARIGHVVEAKILEHLGVDYIDESEVLSPADYVNHIDKRGFNVPFV
CGATNLGEALRRINEGASMIRSKGEAGTGDVSEATKHIRKITSEIAALQAIWANNRDELY
VAAKELQAPYELVAQTAENGKLPVPLLVAGGVSTPADAAFMMELGADGVFVGSGIFKSGN
PEARAKAVVKATKHWNDIAVVTEASRGLGEAMVGINVADLPAPHRLAERGW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagcagaagagttgaaccagaaattcattggcggcgtgatcatggacgtggtc
acgcccgaacaggccaagatcgccgaggacgcaggcgcgtccgccgtcatggcgctggag
cgcgtgcctgccgatatccgcgcccagggtggcgtggcccgcatgtccgacccggacctc
atcgagggcatcatcgacaccgtcaacatcccggtgatggccaaggcccgcatcggccac
gtggtggaggcgaagatcctcgagcacctaggcgtggactacatcgacgaatccgaggtg
ctcagccccgccgactacgtcaaccacattgataagcgcggctttaacgtgccgttcgtc
tgcggcgcgaccaacctcggcgaggcgctgcgccgcatcaacgagggcgcgtccatgatc
cgctccaagggcgaggccggcaccggcgatgtctccgaggccaccaagcacatccgtaag
atcaccagcgagatcgcggcgctgcaggcgatctgggcgaacaaccgtgacgagctctac
gtcgcggcaaaggagctgcaggctccgtacgagttggtggcgcagacggcggaaaacggc
aagctgccggtgccgctgttggttgccggcggcgtgtccaccccggcagacgcggcgttc
atgatggagcttggagcggacggcgtcttcgtcggttccggcatcttcaagtccggcaac
ccggaggctcgcgcgaaggctgtggtcaaggccactaagcactggaacgacatcgcggtg
gtcaccgaggcctcccgcggcctgggcgaggcgatggtgggcatcaacgtcgccgacctt
cccgcgccgcaccgcctggctgagcgcggctggtag
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