Corynebacterium afermentans subsp. lipophilum: CAFEL_06220
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Entry
CAFEL_06220 CDS
T09361
Symbol
hisS
Name
(GenBank) Histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CAFEL_06220 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cafe01007
]
CAFEL_06220 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cafe03016
]
CAFEL_06220 (hisS)
Enzymes [BR:
cafe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
CAFEL_06220 (hisS)
Amino acid related enzymes [BR:
cafe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CAFEL_06220 (hisS)
Transfer RNA biogenesis [BR:
cafe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CAFEL_06220 (hisS)
Prokaryotic type
CAFEL_06220 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
DUF7169
Motif
Other DBs
NCBI-ProteinID:
WJY59011
LinkDB
All DBs
Position
complement(1303465..1304772)
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AA seq
435 aa
AA seq
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MPGVSENKNDQFQKLSAPKGVPDYAPPQSAAFIHVRDEFARQARIAGYQHIELPVFEDTT
LFARGVGESTDVVSKEMYTFEDRGGRSVTLRPEGTAGVMRAFIEHNMDRGYLPVKLNYYG
PFFRYERPQAGRYRQLQQVGVEAIGMDDPLLDAEVIALADRSYRAIGLSGFRLELTSLGD
RNCRPAYREKLQQFLFDLPLDEETRKRAEINPLRVLDDKREEVREMTADAPLMLDHLCDD
CRAHFDAVTAALDSFGVPYVINPRMVRGLDYYTKTTFEFVHDGLGAQSGIGGGGRYDGLM
AQIGGPDLSGIGYGLGVDRAVLALEAEGVELDEASHRVDVFGIAIGDEARVKMSKLIDEL
RAAGVSADMSYGQRGLKGSMKGADRAGARYALVLGERELEAGEVAVKNLAQHSQESVALS
AEAVTQAITSAGAEI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgcccggtgtgagcgagaacaagaacgaccagtttcagaagctttccgccccgaagggt
gtgccggattacgcgccgccgcaatcggcggcgtttatccatgtgcgcgacgagtttgcc
cgtcaggcgcgcatcgccggctaccaacacattgagctgccggtgttcgaggacacgacg
ctcttcgcccgcggtgtgggcgagtccaccgacgtggtgagcaaggagatgtacaccttc
gaggaccgcggcggccgctccgtcacgctgcgcccggagggcactgccggcgtgatgcgc
gcgtttatcgagcacaacatggaccgcggataccttccggtgaagctgaactactacggc
ccgttcttccgctacgagcgcccccaggccggccgttaccgccagctgcagcaggtgggc
gtggaggccatcggcatggacgacccgctgctagacgctgaggtcatcgcgttggctgac
cgcagctaccgtgctatcgggctgagcgggttccgccttgagctgaccagcctgggcgat
aggaactgccggccggcgtaccgcgagaagctgcagcagttcctcttcgatctgccgttg
gatgaggaaacccgcaagcgcgcggagatcaacccgctgcgcgtgctggacgacaagcgc
gaggaagtccgcgagatgaccgcggatgcgccgctgatgctggatcacctctgcgacgat
tgccgcgcccacttcgacgcagtcaccgcggctttggacagcttcggtgtgccgtacgtg
atcaacccccgcatggtgcgcgggctggactactacaccaagaccactttcgagttcgtc
cacgacggcttgggcgcgcagtccggcatcggcggcggcggccgctacgacggcttgatg
gcccagatcggcggcccggacctgtccggcatcggctacggcctcggcgtcgaccgcgcc
gtcctcgcccttgaggcggagggcgtcgagctcgacgaggcttcgcaccgggtggacgtg
tttggcatcgccatcggcgacgaggctcgggtgaagatgagcaagcttatcgacgagctc
cgcgccgccggcgtttccgccgacatgtcctacgggcagcgcggactcaagggctcgatg
aagggcgccgaccgcgccggcgcgaggtacgcgctcgtgctcggggagcgcgagctggag
gccggcgaggtggcggtgaagaacctcgcgcagcactcgcaggagtccgtggcgttgtca
gccgaggccgtgacccaggcgatcacgagcgcgggagccgaaatttag
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