KEGG   Corynebacterium afermentans subsp. lipophilum: CAFEL_06270
Entry
CAFEL_06270       CDS       T09361                                 
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
cafe  Corynebacterium afermentans subsp. lipophilum
Pathway
cafe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cafe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CAFEL_06270 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cafe03400]
    CAFEL_06270 (ruvB)
Enzymes [BR:cafe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CAFEL_06270 (ruvB)
DNA repair and recombination proteins [BR:cafe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CAFEL_06270 (ruvB)
    RecFOR pathway proteins
     CAFEL_06270 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 AAA_14 IstB_IS21 RNA_helicase AAA_22 nSTAND3 AAA_3 Rad17 AAA_18 NTPase_1 MCM AAA_33 Zeta_toxin TsaE Resolvase AAA_19 AAA_17 AAA_25 Sigma54_activ_2 NPHP3_N bpMoxR AAA_28
Other DBs
NCBI-ProteinID: WJY59021
LinkDB
Position
complement(1317445..1318521)
AA seq 358 aa
MSDVEKTEFELPEGFAAKAPSPVDAHAQADEHDIERSLRPKSINEFIGQPKVREQLNLVL
AGARSRGVTPDHILLSGPPGLGKTTMAMIVAQELGTSLRMTSGPALERAGDLAAMLSNLM
EGDVLFIDEIHRIARPAEEMLYMAMEDFRIDVIVGKGPGATSIPLEIPPFTLVGATTRAG
MLTGPLRDRFGFTAQMEFYDVEDLTQVVSRAADILAMRIDQDAAVEIASRSRGTPRIANR
LLRRVRDWADVHGDGHVNLDAARSALSVFDVDELGLDRLDRAVLDALIRGHGGGPVGVGT
LAIAVGEEPGTIEEVCEPYLVRAGLMSRTGRGRVATAAAWEHLGLQAPPDAPGQMSLY
NT seq 1077 nt   +upstreamnt  +downstreamnt
gtgtcggatgtggaaaagacagagtttgagctgccggaagggttcgcggcgaaggctccg
tcgccagtagacgcgcacgcgcaggcagacgagcatgacatcgagcgttcgctacgcccg
aaatcgatcaatgagttcatcggccagcccaaggtacgggagcagctcaacctggtgctt
gcaggtgcgcgcagccgcggggtgaccccggaccacatcctgctgtccggaccgccgggg
ttgggcaagaccaccatggcgatgatcgtggcgcaggagttgggtacctcgctgcggatg
acgtctggtccggctcttgagcgcgcaggcgatctagcggcgatgctgtccaacctgatg
gaaggcgacgtgctgttcattgacgaaatccaccgcatcgcccgtcctgcagaggaaatg
ctctacatggcaatggaggatttccgcatcgacgtgattgtgggcaaaggccctggtgcg
acttcgattccgttggagatcccgccttttaccctcgtcggggcgacaacccgcgcgggc
atgctcacgggcccactgcgcgaccgtttcgggttcaccgcccagatggagttctatgac
gtggaggacttgacccaagtggtcagccgcgccgcggacatcctcgctatgcgcatagac
caagatgcggcggtggaaatcgcctcgcgttcgcgcggcacgccacgtattgcaaaccgc
ctgctgcgccgagtgcgagactgggcggacgtgcacggcgacggccacgtcaacctcgat
gcggcgcgctcggcgttaagcgtgttcgacgtggatgagttgggcctggaccggctagac
cgcgcggttcttgacgcgttgatccgcggccacggcggagggccggtaggcgtgggcacg
cttgccatcgccgttggcgaggaacccggcaccatcgaggaggtgtgcgagccctacctc
gtgcgcgcggggttgatgtctcgaactgggcgcgggcgagtggcgactgccgcggcgtgg
gagcacctggggctgcaggcgccgccagatgcaccggggcaaatgtcgctttattaa

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