Corynebacterium afermentans subsp. lipophilum: CAFEL_06270
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Entry
CAFEL_06270 CDS
T09361
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CAFEL_06270 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cafe03400
]
CAFEL_06270 (ruvB)
Enzymes [BR:
cafe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAFEL_06270 (ruvB)
DNA repair and recombination proteins [BR:
cafe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CAFEL_06270 (ruvB)
RecFOR pathway proteins
CAFEL_06270 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_14
IstB_IS21
RNA_helicase
AAA_22
nSTAND3
AAA_3
Rad17
AAA_18
NTPase_1
MCM
AAA_33
Zeta_toxin
TsaE
Resolvase
AAA_19
AAA_17
AAA_25
Sigma54_activ_2
NPHP3_N
bpMoxR
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WJY59021
LinkDB
All DBs
Position
complement(1317445..1318521)
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AA seq
358 aa
AA seq
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MSDVEKTEFELPEGFAAKAPSPVDAHAQADEHDIERSLRPKSINEFIGQPKVREQLNLVL
AGARSRGVTPDHILLSGPPGLGKTTMAMIVAQELGTSLRMTSGPALERAGDLAAMLSNLM
EGDVLFIDEIHRIARPAEEMLYMAMEDFRIDVIVGKGPGATSIPLEIPPFTLVGATTRAG
MLTGPLRDRFGFTAQMEFYDVEDLTQVVSRAADILAMRIDQDAAVEIASRSRGTPRIANR
LLRRVRDWADVHGDGHVNLDAARSALSVFDVDELGLDRLDRAVLDALIRGHGGGPVGVGT
LAIAVGEEPGTIEEVCEPYLVRAGLMSRTGRGRVATAAAWEHLGLQAPPDAPGQMSLY
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggatgtggaaaagacagagtttgagctgccggaagggttcgcggcgaaggctccg
tcgccagtagacgcgcacgcgcaggcagacgagcatgacatcgagcgttcgctacgcccg
aaatcgatcaatgagttcatcggccagcccaaggtacgggagcagctcaacctggtgctt
gcaggtgcgcgcagccgcggggtgaccccggaccacatcctgctgtccggaccgccgggg
ttgggcaagaccaccatggcgatgatcgtggcgcaggagttgggtacctcgctgcggatg
acgtctggtccggctcttgagcgcgcaggcgatctagcggcgatgctgtccaacctgatg
gaaggcgacgtgctgttcattgacgaaatccaccgcatcgcccgtcctgcagaggaaatg
ctctacatggcaatggaggatttccgcatcgacgtgattgtgggcaaaggccctggtgcg
acttcgattccgttggagatcccgccttttaccctcgtcggggcgacaacccgcgcgggc
atgctcacgggcccactgcgcgaccgtttcgggttcaccgcccagatggagttctatgac
gtggaggacttgacccaagtggtcagccgcgccgcggacatcctcgctatgcgcatagac
caagatgcggcggtggaaatcgcctcgcgttcgcgcggcacgccacgtattgcaaaccgc
ctgctgcgccgagtgcgagactgggcggacgtgcacggcgacggccacgtcaacctcgat
gcggcgcgctcggcgttaagcgtgttcgacgtggatgagttgggcctggaccggctagac
cgcgcggttcttgacgcgttgatccgcggccacggcggagggccggtaggcgtgggcacg
cttgccatcgccgttggcgaggaacccggcaccatcgaggaggtgtgcgagccctacctc
gtgcgcgcggggttgatgtctcgaactgggcgcgggcgagtggcgactgccgcggcgtgg
gagcacctggggctgcaggcgccgccagatgcaccggggcaaatgtcgctttattaa
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integrated database retrieval system