Corynebacterium afermentans subsp. lipophilum: CAFEL_06445
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Entry
CAFEL_06445 CDS
T09361
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CAFEL_06445 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cafe03021
]
CAFEL_06445 (sigA)
Transcription machinery [BR:
cafe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CAFEL_06445 (sigA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SseC
Motif
Other DBs
NCBI-ProteinID:
WJY59049
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Position
1344754..1346271
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AA seq
505 aa
AA seq
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MVASEASSNNADDVTAVSSDGGAGSVAKSSAKKAAKKAAKKTAKKTAKKTVKKTAKKTAK
KTAKKAAKKAAKKTARKTTAKKATAKKATKAAKDAAADADELEDELQAGGNDADELNAQD
VDRDDADFDPEIDDEDDTFDEDIDDALGDDDEDDARDDDAEDDEDEESEDSSSVWDIEES
AALRQARKDAQLTASADSVRAYLKQIGKVALLDAEQEVSLAKRIEAGLYAQYRLDEMARA
AAEGDKDAKLTPAVKRDLRSVARDGRKAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQE
GNLGLIRAVEKFDYSKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQ
RELLQDLGREPTPLELAKEMDITEEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSE
AVVAVDAVSFTLLQDQLQDVLHTLSEREAGVVRLRFGLTDGMPRTLDEIGQVYGVTRERI
RQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
gtggtagccagcgaagcttcaagcaataatgccgacgacgtgactgcagtttcgtccgac
ggtggcgcaggcagcgttgccaaatccagcgcgaaaaaagcggctaagaaggctgcgaag
aaaaccgcgaaaaagaccgccaagaagacggtgaagaagacagccaaaaagacggcgaaa
aagaccgcgaagaaggctgcgaagaaggctgcgaagaaaaccgcgagaaagacgactgcg
aagaaggcaacggcaaagaaggcaactaaagcagcgaaagatgctgccgcagatgccgac
gagttggaggacgagctccaggccggcggtaacgacgctgacgagctgaacgcgcaggat
gtcgaccgcgacgatgcggatttcgatccggagatcgacgacgaggacgacaccttcgac
gaagacatcgacgacgcgctcggcgatgatgatgaggacgacgcgcgcgatgacgacgcc
gaggatgacgaggacgaggaaagcgaagatagctcctccgtctgggacatcgaagagtcc
gccgcactgcggcaggcgcgcaaggacgcgcagctcacagcatctgcggactcggtgcgc
gcgtacctcaaacagatcggcaaggtcgctctgctcgatgccgagcaggaagtctcgctt
gccaagcgcatcgaggccgggttgtacgcgcagtaccgtctcgacgaaatggcgcgcgca
gccgccgaaggcgacaaagacgccaagctcacccccgccgtgaagcgcgacctgcggtcg
gttgctcgcgacggccgcaaggcgaagaaccacctgctggaagcaaacctgcgcttggtg
gtctccctggcaaagcgctacaccggtcgcggcatggctttcttggacctgatccaggag
ggcaacctcggtcttattcgcgctgtggagaagttcgactattccaagggctacaagttc
tccacttacgccacgtggtggatccgccaggccatcacccgcgcaatggcggaccaggcc
cgcaccatccgtattccggtgcacatggtcgaagtcatcaacaagctcggccgtatccag
cgcgagttgctgcaggacctcggccgcgagcccacgccgctcgagctggcgaaggaaatg
gatatcaccgaggagaaagtcctcgagattcagcagtacgcccgcgagccgatctcgctt
gaccagaccatcggcgacgagggcgacagccagctcggcgacttcatcgaggactctgag
gccgtcgtggctgtggacgcggtgtcgttcacgctgctgcaggaccaactgcaagacgtg
ctgcacaccctctccgagcgcgaggccggtgttgtacgtctgcgcttcgggctaacggac
ggcatgccgcgcaccctcgacgagatcggccaggtctacggcgtgacgcgcgagcgcatc
cgccagatcgagtccaagaccatgtcgaagttgcgtcacccgtcgcgctcacaggtgctg
cgcgactacctggattaa
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