Corynebacterium afermentans subsp. lipophilum: CAFEL_07250
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Entry
CAFEL_07250 CDS
T09361
Symbol
polC2
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe03030
DNA replication
cafe03430
Mismatch repair
cafe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAFEL_07250 (polC2)
03430 Mismatch repair
CAFEL_07250 (polC2)
03440 Homologous recombination
CAFEL_07250 (polC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cafe03032
]
CAFEL_07250 (polC2)
03400 DNA repair and recombination proteins [BR:
cafe03400
]
CAFEL_07250 (polC2)
Enzymes [BR:
cafe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAFEL_07250 (polC2)
DNA replication proteins [BR:
cafe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAFEL_07250 (polC2)
DNA repair and recombination proteins [BR:
cafe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAFEL_07250 (polC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PTCB-BRCT
Rv2179c-like
BRCT
Motif
Other DBs
NCBI-ProteinID:
WJY59210
LinkDB
All DBs
Position
1521325..1522716
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AA seq
463 aa
AA seq
DB search
MITAHGATLTVTNEALTLTPTALAASLRGGNNSREVTITDIAGTTSVAGDAWTRPRVDID
TAGGTVAVWFAPGDEEGPAELCKLLDDAKHGHAPATGTVAGGAGIPGFSFVGFDVETANR
RWGSICQIGLVKIVDGEEVDRASWLCKPPASLAQFEEGNVAIHGITEQDVADAPDVCDCI
PKMAEFVGDLPLVAHNAQFDASALRDACQASDVEVPQMLFACTLAQARSTKLDVANHRLP
TLAEHFGITLDNHHDACEDAAACAGVMVGLARQAGHTGSLMTFVHDSGFTLGSIDAARVT
PVLRDRSGAGRTMQAEKAAQGGVAAAVAASAAPQGSNQAGPAKRAQQNKGPQRPWQSVAT
PDTVPEPNTDADPNAPLYGENVTLTGEFEPHDKGELWQKIAAQGAQVGKNVTKKTTVLVV
GEWATVTSKEKRARELKDKGQDIQIWQADQLLEALGLNEQPPF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgcgcacggcgcaacgttgaccgtgaccaacgaggcactgaccctcaccccc
accgcactcgcggcctcgttgcgcggcggcaacaactcccgcgaggtgaccatcaccgac
atcgcaggcaccacctccgtcgcgggcgacgcgtggacccgcccgcgtgtggacatcgac
actgccggcggcactgtggccgtctggttcgctcccggcgacgaggagggccccgccgag
ctctgcaagcttctcgacgacgcaaagcacggccacgcacctgccaccggcaccgtggcc
ggcggcgccggcatccctggcttttccttcgtcggcttcgacgtagagaccgcgaaccgc
cgctggggctcgatttgccagatcggcctggtgaagatcgttgacggcgaagaggtggac
cgcgcctcgtggctgtgcaagccgccggcgtctctcgcacagttcgaggagggcaacgtg
gccatccacggcatcaccgagcaggatgtcgccgacgcgccggacgtgtgcgactgcatt
ccgaagatggccgagttcgtcggcgatctgcctctggtggcgcacaacgcccagttcgac
gcctccgcgctgcgcgacgcctgccaggcctccgacgtcgaggtgccgcagatgctgttc
gcctgcacgctcgcccaggcgcgctccaccaagctggacgtggccaaccaccgcctgcct
accctggcggagcacttcggcatcacgctggacaaccaccacgacgcctgcgaggacgcc
gcggcctgcgccggcgtaatggtgggcctggcgcgccaggccggccataccggcagcctg
atgaccttcgtgcacgactccggcttcacgctcggctccatcgacgccgcccgcgtgacc
ccggtgttgcgcgaccgctccggcgcgggccgcaccatgcaggcggaaaaggcggcccag
ggcggggtcgccgccgcggttgcagcatccgcggcgccgcagggctcgaatcaagcgggc
ccggcgaagcgggcgcagcagaacaaagggccccagcgcccctggcagtccgtggccacc
ccagacaccgtgccggagccgaacacggacgcagatccgaacgcgccgctgtacggcgaa
aatgtcacgctgaccggcgagtttgagccgcacgacaagggtgagctgtggcaaaagatc
gccgcacagggcgcgcaggtgggcaagaacgtgacgaagaagaccaccgtgctggtggtg
ggcgaatgggccacggtgacctcgaaggaaaagcgcgcccgcgagctgaaggacaaaggc
caggacatccagatctggcaggccgaccagctgcttgaggcgctggggttaaacgagcag
ccgccgttttag
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