Corynebacterium afermentans subsp. lipophilum: CAFEL_07825
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Entry
CAFEL_07825 CDS
T09361
Symbol
gabD3
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] 1
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00250
Alanine, aspartate and glutamate metabolism
cafe00310
Lysine degradation
cafe00350
Tyrosine metabolism
cafe00650
Butanoate metabolism
cafe00760
Nicotinate and nicotinamide metabolism
cafe01100
Metabolic pathways
cafe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CAFEL_07825 (gabD3)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CAFEL_07825 (gabD3)
00310 Lysine degradation
CAFEL_07825 (gabD3)
00350 Tyrosine metabolism
CAFEL_07825 (gabD3)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CAFEL_07825 (gabD3)
Enzymes [BR:
cafe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CAFEL_07825 (gabD3)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CAFEL_07825 (gabD3)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CAFEL_07825 (gabD3)
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Motif
Pfam:
Aldedh
LuxC
GYD
DUF1108
Motif
Other DBs
NCBI-ProteinID:
WJY59322
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Position
complement(1645215..1646618)
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AA seq
467 aa
AA seq
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MGRMSTKYRVQNPKNNEIVESFDFITDDELETALATANDTFKQWREKSFEERAEVLRKVA
KLFDEQRAELTRIIAEEMGKSVKEGDGEINDVVEIFNYYADNGAEFGADEEIPNERGGTS
VMRKVPLGVILGIMPWNFPYYQVARFAAPALMAGNVVMVKHAEICPCSAAAIEKIFDEAG
APKGLYTNLYAKHSQVSTLINDDRVQGVSLTGSERAGRTIASQAGQALKKCVLELGGTDA
YVVLDSSDVAKAAETAWNKRIGNVGQACTSNKRMIVMEDIYDEFVQALVDLASSYSEGDP
LNPGEGNEFYPLSSRDAAELLAQQLRLAVEEGANLRVGGEVTGKGAYITPAVITDIPVGS
DSYYEEFFGPVAEVYKVSSEEEAIELANDSRYGLGGAVMSEDAERAKKVAAKVDTGMIHV
NIPQARGAELPFGGVKASGLGRELGPLGMDEFVNHQRFYVAGSDSAV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcatgtctactaaataccgcgtacaaaacccgaagaacaacgagatcgtcgag
tccttcgacttcatcaccgacgacgagctcgaaaccgcgctggccaccgcaaacgacacg
ttcaagcagtggcgcgagaagagcttcgaggagcgcgccgaggtgctgcgcaaggtcgcg
aagcttttcgacgagcaacgcgccgagctcacccgcatcatcgcagaagagatgggcaaa
tcggtcaaggaaggcgacggcgagatcaacgacgtcgtcgagatcttcaactactacgcc
gacaacggcgcggagttcggcgccgacgaggagatcccgaacgagcgcggcggcacctcc
gtcatgcgcaaggtcccgctcggcgtgatcctgggcatcatgccgtggaacttcccgtac
taccaggtcgcccgcttcgcagcaccggcgctgatggccggcaacgtggtgatggtcaag
cacgccgagatctgcccctgctccgccgccgcgattgagaagatcttcgacgaggcgggc
gcgccgaagggcctgtacacgaacctgtacgccaagcactcgcaggtctccacgctgatc
aacgacgaccgcgtccagggcgtgtccctgaccggctccgagcgcgccgggcgcaccatc
gcctcccaggccggccaggcgctgaagaagtgcgtgctcgagctcggcggcaccgacgcg
tacgtcgtgctggattcttccgacgtggctaaggccgccgagaccgcgtggaacaagcgc
atcggcaacgtaggccaggcctgcacgtccaacaagcgcatgatcgtcatggaggacatt
tacgacgagtttgtgcaggcgttggtggacctggcgtcgtcgtatagcgaaggcgacccg
ctcaaccccggcgagggcaacgagttctacccgctgtcctcccgcgacgccgccgagcta
ctcgcgcagcagctgcgcctggccgtggaggagggcgcgaacctgcgcgtcggcggcgag
gtcaccggcaagggcgcctacatcaccccggccgtgatcaccgacatcccggtcggctcc
gactcctactacgaggagttcttcgggcccgtggccgaggtgtacaaggtttcctccgag
gaggaggcgatcgagctggccaacgattcccgctacggcctcggcggcgcggtgatgtcc
gaagacgccgagcgcgccaagaaggtcgccgcgaaggtcgacaccggcatgatccacgtg
aacatcccgcaggcgcgcggcgccgagctgccgttcggcggcgtgaaggcatccggcctg
ggccgcgagctcgggcccctgggcatggacgagtttgtcaaccaccagcgcttctacgtc
gccggctccgactcggcggtgtaa
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