Corynebacterium afermentans subsp. lipophilum: CAFEL_08390
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Entry
CAFEL_08390 CDS
T09361
Symbol
bca
Name
(GenBank) C protein alpha-antigen precursor
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib
RibLong
aRib
TSP3_bac
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
WJY59433
LinkDB
All DBs
Position
1759147..1767900
Genome browser
AA seq
2917 aa
AA seq
DB search
MSTHLTSRRRGTSIAAAALALATVAPLTHAVASPDTAPEAEAVTNSSPADSKWSAPAGTI
DADAIKNGYVNSATDLTNAGSLLSGRVGVMESTAPSSISDSMGLNGVTVFMQFRDSDGTL
SPVYAAQSQALAGQAAGAYAFDLRMRDANGNLVKDKKGNYVSFYDANGKPHLFNASGVGN
GQQAYRLWVAEKDLVNPDTGNQYVYTRQSGGIVPNSWVGVAPGSGQYPADASGMFQLVGQ
NIQRTGIFLTEVVDPAKSYMSAPNVKVDPLGPLNNPATTLSVTDTISGFVWMDTLKGDRK
VGPPTRNTGDGDTNLEGYNVFASVLTPEAQKRVEAIEKDSKITLAQRAGAIKAMLEEMRA
AGKEPIAVTVTGKTDKNGQYTLRTGYKELSGNSRMYMWITDQNGQQVNAYSPFPTPVFQE
YNDNAGEAPHPAAAIVPGMNPAPDNFYNFGFAVVPYGPVKLDIPNYDQLLNPSPLNGTAQ
LNVTGTLPPVPGNRIVWRNETTGEVVKECPVSSLSDANACTFPVSTDPTAAAGTVYSATL
YSGIDDLLASDSFIVAKGQNAVSQPAYRAKETFPGKAVTLNQTDTSVPADTKFTFGTPAD
ASGAPVSGWTTQAASDAGTGGFTANPPAGTAPGEYTIPVQVVYPDGSQETVFAKVTVTPP
QQAEEFTPQGQTTEAIVGTSVPEARSAIANVVDLPADATYSWETPPSTDKEGDFPAVVLV
TYPDGSVDRVEVTVRITPAPAKPLNQTNDPAGQDQTVNLGDTPNAHAAIANADEMPAGTF
YRFESPVDTSTSGDKQAYVIVTYPDDTVDRVPVTVHVRTQAEQFDPSGTQQTVDNGAEVD
PEASISNASELPEGTTFEFEKAPDTTTPGTKDVVVVVTYPDGSVDKVPVKVTVTPQNEQY
APQPAAQVVDQNTTLAPELSLLPNQQLPDGTRIEWATTPDTSTPGTKDGVVRVTYPDGTT
DEVKVQVEVRTQADQYAPAAKTQTVDNGATPKAEDSIADIASLPKGTTFEWEEVPDTSSP
GSKDAVVVVTYPDGSTEKIPVSVVVRTQADALTPESQDHTVDNGSTLDPKDSITNAGDLP
EGTKFAFETQPSTNKPGTYTTNVIVTYPDGSVDTVPVKVTVRPLSDTTDPKGADITVDNG
QAVTPEDVLTNEADLPEGTTLALENPVDTSKPGKQEVTVVVTYPDGSTEKVTTTVTVRPQ
ADSNSPVGQDIDVVEGAEAYPESAITNNGDLPAGTTFTWATEPDTSATGTQDAVVRVTYP
DGSTEDVPVKVNVTPKPAEPMNTTNDPAGQDVTVKATSALNARDAVADADSLPAGTHFEF
VNPPSTDKPGTFDNVEVRVVYPDDTVDTITVTVTVTQLADDYAPAAAEQTVDNGATPDAA
ASIGNLSDLPAGTKVEWDSTPDTSSPGDKTGTVKVTYPDGSTDTVEVTVTVRPQADTSTP
APKVRTVENGAKDLRPEDSIANTDDLPGATYTWQTPPDTSKPGVQDVSITVTYPDGSSEE
VTTQIVVSPLADANEPTGQPQTVDRDAAVDPKASISNANDLPEGTTFTFESHVDTATSGT
KDAVVLVTYPDGSVDRVSVQVNVRTDEQYYAPAGRTQTVNIGEDPAPAASIVNPDSLPVG
TKLTWESAPDTSSSGVKDAVVRVEYPDGTSETVSVTVSVRSNEQQYTPHAGLQVVDKGAQ
PQAADSVDNAGELPDGTEFTWVSTPDTSSPGQKTGEVLVTYPDGTTETLPVVVQVRDDAA
MHEPTATDQVVNQGEAADPRASVSGDLPDGTNLTWEQPVDTSTSGVKDAVVVVTYPDGSV
DRVPTKVIVRTHTDQHDAAGQDITAVEGADAPPARTAIANVAELPADAVYTWSVAPDTSA
TGDVPAVVLVTYPDGTVDRVPVTVHVVAAPKTPMNEQHTPSAGEQTVNVGDSVVPRASVG
NVDDLPAGTHFEFTQPVDTSTPGNKDAEVLVTYPDGTTDTVKVTVAVRSQADQFSPEGQP
QSTNNGQVPAATGSIANASELPAGTTVTWKTEPDVSAPGDKDAEVLVTYPDGSTETVKVK
VSVREQSEQFNPAGKDQSVKEGDAPEASASIANPELLPEGTTITWEDAPDTSTPGTKDAT
VVVTYPDGTTDKVNVHVAVGSMNDQHDPVGKDQSVTSGDVPQAGNSVANVADLPAGTTFG
WETAPDTSTPGAKQATVVVTYPDGSIDTVDVTVDVASQADTHDPQGQGIQAVVDTPAPNA
ATAIANASDLPAGTTITWDSEPDTSTPGTTTATVVVTYPDKTEDRVPVEVTVIEAPSTPM
NESHQPVTRPVFTQQLVDAPSATTAVVNADTFPPGTHIKWTTEPDTSVPGEQTASITVTY
PDGTKDVVETTLTVGESLSTTHTPFWNQTHAQPGAKVTLPQVGDHAMPEGTTFTVDNPEF
VIADDGTAYVTLPADAAPGDVFTTTVTIRYPDGSYETEEIRVTAEMPYNPGYGDPVAAAL
GGSGTALLTFEVAPDVSEAHITATHDHNGLWQISDPDTRGNITAVGPTLEALAKLYTGKE
SVAELASLFDASADVTVTYRPGVPADEDVTARFTLVAVDGTPMAQVSDWDGDGVSNEDEV
NKGTNPFDPASVPAEPAPVPEDPTDVYPPEVTVTPGGTTEIPAPALPDDATVTPAPSVPD
WVDVKPDGNVIVTPPEDVKPGTYPVEVEITRPDKDPSKATIDVTVTEPEKPTDVYPPEVT
VTPGGTTEIPAPALPDDATVTPAPSVPDWVDVKPDGNVIVTPPEDVKPGTYPVEVEITRP
DKDPSNAVIDVTVTEPAPVPEKPTDTAPAPSGSSALTEEERGRCIATGVGFGLPLLALIP
IAIGSQVSLPWVDEFSQQASAALQDFNTQLQQKTGLYNPDVAQQVDSINRQLQAFGREHE
TVISGAGAVAVAALVVTLLWKNCTPGEKLSSESSSQK
NT seq
8754 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacgcacctgacgtcccgtcgacgcggcacctccatcgctgccgccgcacttgcc
ctcgccaccgttgccccgcttacacatgcggtggcctcccccgacactgccccagaagct
gaggctgtgaccaacagcagcccggccgactcgaagtggtctgcaccggctggaaccatc
gacgcagacgccatcaaaaacggctacgtcaacagcgccaccgacctcactaacgccggg
agcctgctctccgggcgcgtcggcgtcatggaatcaaccgcgccgtcgagcatcagcgac
tccatgggtctcaacggtgtcacggtgttcatgcagttccgcgactccgacggcacgctt
tcccccgtctacgcggctcagtcccaggccctggcggggcaggccgccggcgcctacgct
ttcgacctgcgcatgcgcgacgcaaacggcaacctggtcaaggataaaaagggcaactac
gtttccttctacgacgccaacggtaaaccgcacctgttcaacgcctccggcgtgggcaac
ggccagcaggcgtaccgcctgtgggtggcggaaaaagacctggtcaacccggatacgggc
aaccagtacgtctacacccgccaatccggcggcatcgtgcccaactcctgggtcggcgtg
gcgccgggctctggccagtaccccgcggacgcgtccggcatgttccagctggttggccag
aatatccagcgcaccggcattttcctcaccgaggtggtagaccccgccaaaagctacatg
tccgcccccaacgtcaaggtcgatccccttggcccgctgaacaacccggcgaccacgctt
tctgtcactgacaccatctccggtttcgtgtggatggacacgctcaagggcgaccgcaag
gtcggcccgccaacccgcaacacgggcgacggcgacaccaacctcgagggctacaacgtc
ttcgcttcggtgctgacccccgaagcccaaaagcgcgtcgaggccattgaaaaagattcc
aagatcacgctggcgcagcgagcgggcgctatcaaggccatgctcgaggaaatgcgggct
gctggcaaggaaccgatcgcggtgaccgtcaccggaaagaccgacaaaaacggccagtac
accctgcgcaccggctacaaggaactctccggcaactcgcgcatgtacatgtggatcacg
gaccagaacggccagcaggtcaacgcgtattctcctttccccactccggtgttccaggag
tacaacgacaacgccggcgaggctccccaccccgccgcggccatcgtgccgggcatgaac
cccgcgccggacaacttctacaacttcggcttcgcggtcgtgccctacgggccggtgaag
ttggacattcccaactacgaccagctgctgaacccgtcgccgctgaacggcacggcgcag
ctcaatgtcacgggcacgctgccgccggtgccgggcaaccgcatcgtctggcgcaacgaa
accacaggcgaggtagtcaaggagtgcccggtgtcctcgctttcggacgcgaacgcgtgc
accttcccggtgtccacggatcccactgccgccgccggaaccgtgtactcggcgaccctc
tacagcggcatcgacgacctgctcgcgtctgactcctttatcgtggccaagggccaaaac
gcagtgagccagccggcctaccgtgccaaggaaaccttccccggcaaggccgtcacactg
aaccagacggacacgtccgttccggcggacacgaagttcaccttcggcacgcctgccgac
gcctccggtgcccccgtttccggctggaccacgcaagcagcttcggatgcaggcaccggc
gggttcaccgccaacccgcccgcaggcaccgcgcccggcgagtacacaatccccgtgcag
gtggtttacccggacggctcgcaggagacggtcttcgccaaagtcaccgtcacgccaccc
cagcaggcggaggagttcaccccgcagggccaaaccaccgaggccatcgtgggcacctct
gtgccggaggcgcgctccgccatcgccaacgtggtggacctgccggcggacgcgacctac
agctgggaaacaccgccgtccaccgacaaggagggcgacttccccgcggtagtcctggtc
acctaccccgacggctcggtggaccgcgtggaggtgacggtgcgcatcaccccggcgccc
gcgaagccgctgaaccagaccaacgatccggccggtcaggaccagacggtcaacctgggc
gataccccaaatgcccacgcagccatcgccaacgcggacgagatgccggccggcacgttc
taccgcttcgagtcgccggtggacacctccacgtccggcgacaagcaggcctacgtcatt
gtcacctaccccgacgacaccgtggaccgcgtgccggtgacggtgcacgtgcgcacgcag
gcggagcagttcgacccgtccgggacgcagcagacggtggacaatggggctgaggtggac
ccggaggcgtcgataagcaacgcaagcgagctgccggagggcaccaccttcgagtttgag
aaggcgccggacaccacgacgccgggcaccaaggatgtcgttgtggtggtgacctacccg
gacggcagcgtggacaaggtccccgtgaaggtcacggtcaccccgcaaaacgagcagtac
gccccgcagcccgcggcacaggtggtggaccagaacacgacactcgccccggagctgtcc
ctgctgccgaaccagcaacttcccgacggcacccgcatcgaatgggccaccaccccggac
acctccacgccgggcaccaaagacggcgtcgtgcgcgtgacctaccccgacggcacgacc
gacgaagtcaaggtgcaagtggaggtccgcacccaggcggaccagtacgccccggcggcg
aagacgcagaccgtggacaacggcgccaccccgaaggcggaagactccatcgccgacatc
gcatcgctgccgaagggcaccacgttcgaatgggaggaagtgcccgacacctcctcgccg
gggtcaaaggacgccgttgtggtggtcacctaccccgacgggtccaccgaaaagatcccg
gtgagcgttgttgtgcgcacgcaggccgacgcgctcacccccgagagccaggaccacacc
gtggacaacggcagcacgttggacccgaaggactccatcaccaacgcgggcgacctgccg
gagggcaccaagttcgcctttgagacgcagccttcgaccaacaaaccaggcacgtacacc
accaacgtcatcgtcacctaccccgacggcagcgtggacacagtgccggtgaaggtcacc
gtgcgcccgctttcggacaccactgacccgaagggcgccgacatcaccgtcgacaacggc
caagcagtcaccccggaagacgtgctgacaaacgaggccgacttgccggaaggcaccacg
ctcgcgctggagaacccggtggacacctcgaagccgggcaagcaagaggtcaccgtggtt
gtcacctacccggacggctccaccgagaaggtcaccacaaccgtcacggtgcgcccgcag
gcggacagcaactcccccgtgggccaggacatcgacgtggtcgaaggcgccgaggcgtac
cccgagtcggcgatcaccaacaacggcgacctgcccgccggcaccacctttacctgggcc
accgagccggacaccagcgcaaccggcacccaggacgcggtcgtgcgcgtgacctacccg
gacggctccaccgaggacgtgccggttaaggtcaacgtcacaccgaagcccgccgagccg
atgaacacgaccaacgatccggctggccaggatgtcaccgtcaaggccaccagcgcgctg
aacgcccgcgatgccgtggcagacgcggactcgctgccggctggcacgcacttcgagttt
gtcaacccgccgtcgacggacaagcccggcacgttcgacaacgtcgaagtgcgcgtggtg
tacccggacgacacggtcgacaccatcaccgtgacggtcaccgtcacccagcttgcagac
gactacgcccccgccgccgcggaacagaccgtggacaacggcgccaccccggacgccgcc
gcatccatcggcaacctttcggacctgccggccggcacgaaggtggaatgggacagcacg
cctgacacctcctcccccggcgacaagaccggcaccgtgaaggtgacctaccccgacggc
tccaccgacaccgtcgaggtcaccgtcaccgtgcggccgcaggccgacacctccacgccc
gcacccaaggtgcgcaccgtggaaaacggcgccaaggacctgcgcccggaggactccatc
gccaacaccgacgacctgcccggcgcgacctacacctggcagacgccaccagataccagc
aagcccggcgtccaggacgtctccatcaccgtcacctacccggacggctcctccgaggag
gtcacaacccagatcgttgtgagcccacttgcagacgcgaacgagccgactggccagccg
cagacggtggatagggatgctgcggtggacccgaaggcgtcgataagcaacgcaaacgac
ctgcccgaaggcaccacctttaccttcgaatcccacgtagacaccgcgacctccggcacc
aaggacgcggtggtgctggtgacctacccggacggctccgtcgaccgcgtcagcgtgcag
gtcaacgtacgcaccgacgagcagtactacgcccccgccggcagaacgcagaccgtcaac
atcggcgaagaccccgcgcctgccgcctccattgtgaacccggattcgctgccggtgggc
accaagctgacgtgggagagcgcaccggatacctcgagcagcggtgtgaaggacgccgtg
gtgcgcgtggagtaccccgacgggaccagcgaaaccgtgagcgtgaccgttagcgtccgc
tccaacgagcagcagtacaccccgcacgcggggctgcaggtggtggacaagggcgcgcag
ccgcaggccgccgactccgtggacaacgccggcgagcttcccgacggcaccgagttcacc
tgggtgtccacgcccgacacctcctcgcccggccagaagaccggcgaagtgctggtgacc
tacccggacggcaccacggagaccctcccggtcgtggttcaggtgcgcgacgacgccgcg
atgcacgagcccacagccaccgaccaggtggtcaaccagggcgaggccgccgacccgcgc
gcgtcggtgtccggcgacctgccggacggcacgaacctcacctgggagcagccggtggac
acctcgacatccggcgtgaaggacgccgttgtcgtggtgacctacccggacggctccgtt
gaccgcgtgccgacgaaggtcatcgtgcgcacccacaccgaccagcacgacgctgccggc
caggacatcaccgctgtcgaaggcgccgacgcgccgccggcgcgcaccgccatcgccaac
gtggcggagctgccggccgatgccgtctacacgtggtcggtcgcgccggatacctctgca
accggcgacgtcccggccgtcgtgctggtgacctacccggacggcacggtggaccgcgtc
ccggtcaccgtccacgttgtcgcggcgccgaagaccccgatgaacgagcagcacaccccg
agcgctggcgagcagaccgtcaacgtcggcgacagcgtcgtgccgcgcgcttccgtgggc
aacgtggacgacctgccggctggcacccacttcgagttcactcagccggtggacacctcc
accccgggcaataaggacgccgaggtgctggtgacctaccccgacggcacgaccgacact
gtgaaggtcaccgttgccgtgcgctcccaggccgaccagttctccccggagggccagccg
cagagcaccaacaacggacaagtgccggcggccaccggctcgattgccaacgcctccgag
ctgcctgccggcaccacggtgacctggaagaccgagccggacgtctccgccccgggcgac
aaagacgccgaggtgcttgtgacctaccccgacggttccactgagaccgtgaaggtgaag
gtcagcgtccgcgagcagtccgagcagttcaacccggccggtaaggaccagtccgtgaag
gagggcgatgcccctgaggcgtccgcgtctattgccaacccggagctgctccccgagggc
accacgattacttgggaggacgcgccggacacctctaccccgggcacgaaggatgccacg
gtggtggtgacctacccggacggcaccaccgacaaggtcaacgtccacgttgccgtaggt
tccatgaacgaccagcacgacccggttggaaaggaccagagcgtcaccagcggcgatgtg
ccgcaggccggaaactccgtggcgaacgtggccgacctgcccgcggggaccacattcggc
tgggaaaccgccccggacacctctactccgggcgcaaagcaggccacggtggtggtgacc
tacccggacggctccatcgacaccgtggatgtcaccgttgacgtggcaagccaggccgac
acgcacgacccgcagggccagggcatccaggccgtggtggacactcctgcgccgaacgcc
gccaccgctatcgccaacgcgtccgacctgccggccggcaccaccatcacctgggacagc
gagcccgacacctccacacctggcaccactaccgcgactgtggtggtgacctacccggac
aagaccgaggaccgggtgccggtggaggtcaccgtcatcgaggcaccttcgactccgatg
aacgagtcccaccagcctgtcacccgcccggtatttacgcagcagcttgtcgacgcccct
tcggccaccaccgccgtcgtcaacgccgacaccttcccgccgggcacccacatcaagtgg
accaccgagccggacacctccgtgcccggcgagcagacagcgtcgatcaccgtgacctac
ccggacggcaccaaggacgtcgtggagaccaccctgaccgtgggtgaatcgctgtccacc
acgcacaccccgttctggaaccagacccacgcccagccaggcgccaaggtgaccttgccg
caggtcggcgaccacgccatgccggagggcaccaccttcaccgtggataacccggagttc
gtcatcgccgacgacggcaccgcctacgtcaccctgcctgcggatgcggcaccgggcgat
gtctttaccaccaccgtgaccatccgctacccggacggctcgtacgagacggaggaaatc
cgggtcaccgccgagatgccctacaacccgggctacggcgaccccgtcgccgccgcgctc
ggcggttccggcacggcgcttttgaccttcgaggtcgctccggatgtctccgaggctcac
atcaccgctacgcacgaccacaacgggctgtggcagatctccgacccggacacccgcggc
aacatcaccgcagtgggtccgacgctggaggcgctggcgaagctgtacaccggcaaggag
tcggtcgcggagctcgcatcgcttttcgacgcctccgccgacgtcaccgtcacctaccgc
ccaggcgtgcccgccgacgaggacgtcaccgcccggtttactctcgtggcggtcgacggc
acgccgatggcgcaggtctccgactgggacggcgacggtgtgtccaacgaggacgaggtg
aacaagggcaccaacccgttcgacccggcatctgtgccggccgagcccgctcccgtgcct
gaagatcccaccgacgtctacccaccggaggtgaccgtcaccccgggcggcaccactgag
atcccggcgccggcactgccagatgacgccaccgtcaccccggcacccagcgtgcccgac
tgggtcgacgtcaaacccgacggcaacgtcatcgtcaccccgccggaagacgtcaagccg
ggcacctaccccgtcgaggtcgaaatcacccgccccgacaaggacccgagcaaggccacc
atcgacgtcaccgtcaccgagcccgaaaagcccaccgacgtctacccgccggaggtgacc
gttaccccgggcggcaccactgagatcccggcgccggcactgcctgacgacgccaccgtc
accccggcacccagcgtgcccgactgggtcgacgtcaaacccgacggcaacgtcatcgtc
accccgccggaagacgtcaagccgggcacctaccccgtcgaggtcgaaatcacccgcccc
gacaaggacccgagcaacgcggtcatcgacgtcaccgtcaccgagcccgctccggtgccc
gaaaagcccaccgacacggcccctgcgccgtctgggtcctcggcactgacggaggaggag
cgcggtcgctgcatcgccaccggcgtcgggttcgggctgccgctgctcgcactgatcccg
atcgcgatcggctcgcaggtcagtttgccgtgggtcgacgagttctcgcagcaggcaagc
gcagcgctgcaggacttcaacacccagctgcagcagaagacgggcttgtacaacccggat
gttgcgcaacaggtggacagcatcaaccgccagttgcaggcgttcggccgcgagcacgag
acagtgatcagcggcgccggcgcggtcgccgtggcagcgctcgttgtcacgctgctgtgg
aagaactgcaccccgggcgagaaactgagctccgagtccagcagccagaagtag
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