Corynebacterium afermentans subsp. lipophilum: CAFEL_09945
Help
Entry
CAFEL_09945 CDS
T09361
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CAFEL_09945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cafe02000
]
CAFEL_09945
Transporters [BR:
cafe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CAFEL_09945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Anthrone_oxy
DUF87
AAA_29
AAA_16
HUTI_composite_bact
CyanoTRADDas_TM
nSTAND1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WJY59727
LinkDB
All DBs
Position
2088303..2090009
Genome browser
AA seq
568 aa
AA seq
DB search
MDLIRLTARFGKPYAGKIALVIALQLVTTLATLYLPDLNADIINNGVAQADVPYIWRTGR
TMLVVALVQVAAAIAAVWFASQVAMDTGRDIRAAVYNRVSDFDSEDMARFGAATMVTRGT
NDVQQVQMTFLLFMNFMVAAPIMAIGGIIMALRQDAGMSWLVVAAVIVLAVVVGITAAIL
MPLFKRMQKRLDAINGLLREQIAGIRVVRAFGREDYEAERFTEANHDITRLSLNIGRVFV
TMFPVIMLILNLATAAVLWFGGHRVDEGLVEVGSLTAFMQYLMQILMAVMMGVFMLMMLP
RAIVCADRIEEVLGHEVKASVAEGASIGKGNVRFEDVSYTYPGAEKPVLEGISFEARPGT
TTAIIGSTGSGKTTLAGLLPRLYSPTSGQVLIDGHPVTRIPRQELVKAVAMVPQKPWLFS
GTVASNLRMGNPDATDDELWAALRTAQAEFVDDLNMPISQGGTNVSGGQRQRLCIARMFV
ADPKVYVFDDSFSALDATTEANLNAAMREIVQERTVIVVAQKVSSIRHADQILVLEAGRI
VARGTHDELLETSETYREIAASQAEVDA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtggatctcatccgtcttaccgcgcgcttcggcaaaccctacgccggcaagatcgcgctg
gtcatcgcgctgcagctggtcaccaccctggccacgctgtacttgccggacttgaacgcg
gacatcatcaacaacggcgtcgcccaggcggacgtgccgtacatctggcgcaccggccgc
accatgctggtggtggcgctggtgcaggtcgcggcggcgatcgcggcggtgtggttcgcc
tcccaagtggccatggacaccggccgcgacatcagggccgccgtgtacaaccgggtgtcc
gatttcgacagcgaggacatggcccgcttcggcgccgccacgatggtcacgcgcggcacg
aacgacgtccagcaggtgcagatgacgttcctgctgttcatgaacttcatggtcgcagca
cccatcatggccatcggcggcatcatcatggcgctgcgccaggacgcgggcatgtcgtgg
ctggtggtcgcggcggtcatcgtcctggccgtcgtggtgggcatcaccgcggcgatcctg
atgccgctgttcaagcgcatgcagaagaggctcgacgcgatcaacggtctgttgcgcgag
cagatcgcgggtatccgcgtggtgcgcgcgttcggccgcgaggactacgaggccgaacgg
ttcaccgaagcgaaccacgacatcaccaggctgagcctgaacatcggcagggtgttcgtg
accatgttcccggtgatcatgctcattctgaacctcgccacggccgcggtgctctggttc
ggcggtcaccgcgtggacgagggcctggtggaggtcggctcactcaccgcgttcatgcag
tacctgatgcagatcctcatggcggtgatgatgggcgtgttcatgctgatgatgctgccg
cgcgcgattgtttgcgcggatcgcatcgaggaggtgctcgggcatgaggtgaaggcgtcg
gtggccgaaggggcgtcgataggcaaaggcaacgtgcgcttcgaggatgtctcctacacc
tacccgggcgcggaaaagccggtgctggagggcatttcgttcgaggcccgcccggggacc
acgaccgcgatcatcggctcgacgggcagcggcaagaccacgctcgccggtctgctgccc
aggctgtactccccgacttcaggacaggtgcttatcgacggccatccggtcacccgcatc
ccgcgccaggaactggtcaaggccgtcgcgatggtgccgcagaagccgtggctgttctcc
ggcacggtggcgtcaaacctgcgcatgggcaacccggacgccacagatgacgagctgtgg
gcggcgctgcggaccgcgcaggcagaattcgtggacgatttgaacatgccgatctcccag
ggcggcaccaacgtctccggtgggcagcgccagcgcctgtgcatcgcgcggatgtttgtg
gcggatccgaaggtgtacgtcttcgacgactcgtttagcgcgctggacgcgaccaccgag
gcgaacctgaacgcggcgatgcgcgagatcgtgcaggagcgcaccgtgatcgtggtggcg
cagaaagtgtcctcgatcaggcacgcagaccagattctggtgctggaggccgggcgcatc
gtcgcgcgcggcacccacgacgagctgctggagaccagcgaaacgtaccgggagatcgcg
gcgagtcaggcggaggtggacgcatga
DBGET
integrated database retrieval system
