Corynebacterium afermentans subsp. lipophilum: CAFEL_10590
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Entry
CAFEL_10590 CDS
T09361
Symbol
dnaB
Name
(GenBank) Replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAFEL_10590 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cafe03032
]
CAFEL_10590 (dnaB)
Enzymes [BR:
cafe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CAFEL_10590 (dnaB)
DNA replication proteins [BR:
cafe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CAFEL_10590 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_22
TIP49
AAA_16
SLFN-g3_helicase
AAA_24
DEAD
TniB
nSTAND3
AAA_18
AAA
AAA_19
AAA_5
DHO_dh
GvpD_P-loop
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WJY59852
LinkDB
All DBs
Position
complement(2233510..2235027)
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AA seq
505 aa
AA seq
DB search
MGADDSFDDYVPPPEPATDFGDFSDSDFEAFQGNNGSSRGRGGRGGSSSRSNRYSNFNRG
NNELQEYRTPPHDELAERSVIGAMLLNPDVILDVAESLRPDDFYFPAHQLTYQAILDLFA
QGSNIDVLIVAGRLDRINELERVGGAPYLHTLISEVPTAANARYYAEIVEEKSILRQLVN
AGTQVVQLGYEGEEGMEVDAIVDHAQQKVFNITRNQSGEDYRPLSDLLKPTIDELTMIAS
GGALEAGVPTGFIDLDKLTNGLHAGQMIIIAARPGVGKSTLALDFMRSCSIHQNKTSVIF
SLEMSASEIIMRMLSAETEIKLSAMRSGQMEERDWEKLTHRLTEIQDAPLFIDDSPNLTM
MEIRSKARRLKQQHGLDLVVVDYLQLMSSGKKVESRQQEVSEFSRHLKLLAKELEVPVIA
ISQLNRGPEARTDKRPQLADLRESGSLEQDADMVFLLYRPDSQDRDDERAGEADIIVAKH
RGGPIDTIPVAHQLHYSRFVNMAHG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcagacgacagcttcgacgactacgtgccgccgccagagccagccacggatttc
ggggacttcagcgactccgactttgaggcgttccaaggcaacaatggcagctcgaggggg
cgtggcgggcggggcggcagctcgtcgagaagcaaccgctactccaacttcaaccgtggc
aacaacgagctgcaggagtaccgcaccccgccgcacgacgagctggcggagcgttccgtc
atcggtgcgatgctgctcaacccggacgtcatcttggatgtggcggagagcctgcgcccg
gacgacttctatttcccggcgcaccagctgacctaccaggccatcctggacctgttcgcg
cagggcagcaatatcgacgtgctcatcgttgccggccggctggaccgcatcaacgagctc
gagcgcgtcggcggcgcgccgtacctgcacacgctcatctctgaggtgcccacggcggcg
aacgcgcgctactacgcggagatcgtggaggagaagtcgatcctgcggcagctggtcaac
gccggcacccaggtggtgcagctcggctacgagggcgaagagggcatggaggtcgacgcc
atcgtcgaccacgcccagcagaaggtcttcaacatcactcgcaaccagtcgggcgaggat
taccgcccgctgtcggacctgctcaagccgacaattgacgagctgaccatgatcgcctcg
ggcggcgcgctcgaagcgggtgtgcccaccgggttcatcgacctggacaagctcaccaac
ggcctgcacgccggccagatgatcatcatcgcggcgcgaccgggtgtgggtaagtccacg
ctcgcgcttgacttcatgcgctcctgctcgatccaccagaacaagacgtccgtgatcttc
tcgctggagatgagtgcctccgagatcatcatgcgcatgctgtccgcggagacggagatc
aagctctccgcgatgcgctcgggccagatggaggagcgcgactgggagaagctcacccac
cgcctcaccgagatccaggacgcgccgctgttcatcgacgactcgccgaacctcaccatg
atggagatccgctccaaggcgcgccgcctgaagcagcagcacggcttggatctggtggtg
gtggactacctgcagctgatgagctccggcaagaaggtcgagtcacgccagcaggaggtc
tcggagttctcccgccacctcaagctcctggccaaggagctcgaggtgcccgtgatcgcc
atctcccagctcaaccgtggcccggaggcgcgcaccgacaagcgcccgcagctggctgac
ctgcgtgagtccggctcgctggagcaggacgccgacatggtgttcctcctctaccgcccg
gactcacaggaccgcgacgacgagcgcgcgggcgaggcggacatcatcgtggcgaagcac
cgcggcggcccgatcgacaccattccggtggcgcaccagctgcactactcgcgcttcgtc
aacatggcccacggctag
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