Chloroflexus aggregans: Cagg_0201
Help
Entry
Cagg_0201 CDS
T00824
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
cag
Chloroflexus aggregans
Brite
KEGG Orthology (KO) [BR:
cag00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Cagg_0201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cag03021
]
Cagg_0201
Transcription machinery [BR:
cag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cagg_0201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r1_1
T3SSipB
Sigma70_r4_2
DUF7607
NAT_N
Motif
Other DBs
NCBI-ProteinID:
ACL23149
UniProt:
B8GCU9
LinkDB
All DBs
Position
complement(251218..252414)
Genome browser
AA seq
398 aa
AA seq
DB search
MTQSQPETDRTSSAISPADVQALIAQGRQQGFVTFEDIQRLVPNLEESVEQIDSIYAALA
EAGVPVHDGDEPVSGDESLTPSVTDLDLDDELSDALLSDSVRLYLREIGQVPLLTAEQEK
QLAQMIERGQAAERKLATLPPDSPEAAKLRRIKEQGDEARQKMAAANLRLVVSIAKRYRD
RGLPLLDLIQEGSLGLLRAIEKFDHTKGYKFSTYATWWIKQALSRALADQSRLVRLPVHL
GETLNRIQSARRQLTQSLGREPTDTELANHLGMSEEKLRELRRTAQDPVSLATPVGEEAD
STLADFIPDPHALDADDAAASGMLRQQIAAALDQLSERERRVLELRYGLADGQPRTLEEV
GKAFGVTRERVRQIEVKALRKLRHPRLGKLLKDYLDQA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagagccagcccgagaccgaccgcaccagttctgcgatcagccccgccgatgtg
caggccctgatcgcgcagggacggcaacagggctttgtcacctttgaggatattcagcgg
ctggttcccaatctcgaagagtcggtcgagcagatcgacagtatttatgccgccttagcc
gaagccggtgttcccgtccacgacggtgatgaaccggttagtggggatgagtcgctgaca
ccgtcagtaaccgatcttgacctcgacgatgagctgtcagacgcactgcttagtgatagt
gtgcgcctctatttgcgcgagattgggcaagtgccgctgttgaccgccgaacaagagaag
cagttggcacagatgatcgagcgcggccaagcggctgagcgtaaactggctacgctgccg
cccgacagccctgaagcagcaaagttgcgtcggataaaggagcagggcgatgaagcacgc
caaaagatggcagcagcgaacttgcgtttggtcgtgagcatcgccaaacgttaccgtgat
cgtggtctgccgctgctcgacctgattcaggaggggagtcttggcctgctccgcgctatc
gaaaaattcgatcacacgaaggggtataagttcagtacctatgcgacatggtggatcaag
caggccctctcccgtgcgctggccgaccagtcacgattagtgcgcttgcccgttcatctc
ggtgagacgctcaatcggattcagtctgcgcgtcggcaactcacccagtcgctgggccgt
gagccgaccgatactgagctggcgaatcatcttgggatgagcgaagaaaagctgcgtgaa
ctacggcggactgcgcaagatccggtttcgcttgcgacaccggtcggtgaagaggctgat
agtacgctcgccgacttcatccctgatccgcacgcgctcgatgctgacgatgccgccgct
agcggtatgttgcgccagcagattgccgctgccctcgaccagctcagtgagcgtgaacgg
cgggtgcttgagctgcgctacggtcttgccgatggccaaccacgcacacttgaagaggtg
ggcaaagcatttggggtgacacgcgaacgggtgcggcaaattgaagtgaaggcgctgcgc
aagctgcgccatccccgcttagggaagctgctgaaggattacctcgatcaggcgtag
DBGET
integrated database retrieval system
