Chloroflexus aggregans: Cagg_1416
Help
Entry
Cagg_1416 CDS
T00824
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
cag
Chloroflexus aggregans
Pathway
cag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cagg_1416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cag03400
]
Cagg_1416
DNA repair and recombination proteins [BR:
cag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cagg_1416
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cagg_1416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_16
AAA_22
AAA_30
AAA_5
AAA_25
DUF87
nSTAND3
TrwB_AAD_bind
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ACL24323
UniProt:
B8G8R1
LinkDB
All DBs
Position
complement(1742949..1744943)
Genome browser
AA seq
664 aa
AA seq
DB search
MPFRIEAPYQPTGDQPQAIEKLVAGLRAGYRHQTLLGATGTGKTFVMAHIFAQIQRPTLV
LAHNKTLVSQLWAEFREFLPDAAVEMFISYYDEYTPEAYVPSKDLYIEKEASINEEIDRL
RHAATQALLTRRDVLIVASVSAIFGLGSPHDYGQEKIHLRTGEVRNRDKLLRQLIDLQFE
RNDVDFQRGTFRVRGDTLDIIPANAETAIRVEFWGDEIERIVELDPLTGEVLLKHTAVEI
YPAKHFVTTKEKLQLAIVSIQAELNERLQELEAAGKLLEAQRLKQRTLYDLEMLSEVGYC
SGIENYSRHLDGRAPGQTPWTLLDYFPDDFLMFIDESHITIPQLRGMYNGDRQRKQTLVD
YGFRLPSALDNRPLKFEEFEQHVYQVIYVSATPGPYEREKSEQIVEQIIRPTGLLDPEIE
VRPTRGQIDDLLGEIRRRVERKQRVLVTTLTKRMAEDLADYLKEMGVRTMYLHADIDTIE
RVEILRDLRLGVYDVVVGINLLREGLDLPEVSLVAILDADKEGYLRSETSLIQIIGRAAR
HIEGKVIMYADTITRSMEVAIRETQRRREIQMAHNVRHGITPQGIAKGVRDLTDRIRKVA
EERGEYVTTPETAVPVDLPRDEVLKLIKDLEKQMKQAAKALAFEKAAALRDQIVELRQAL
ALSE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttcggattgaagcgccctatcagccgaccggtgatcagccacaagcgatagag
aaacttgtggccgggttgcgggccggctatcgtcatcagacgctgctcggtgcaaccggc
accggcaaaacgtttgtgatggcgcatatttttgcccaaattcagcgccctacgctcgtg
cttgcccataacaagacgctggtctcgcaactatgggccgagttccgtgagtttttgcct
gatgccgcagtcgagatgtttatctcgtactacgatgaatatacgcccgaagcctatgtg
ccctcaaaagacctctacatcgagaaagaggctagcattaatgaagaaatcgaccgtctg
cgtcacgcggcgacccaagcactgctgacccgccgcgatgttctgattgtcgcttcggtt
tcggcgatctttggtctcggttcacctcacgactacggtcaagagaaaattcacctccgt
accggtgaagtccgtaaccgcgataaactgttacgccaactgatcgatttacaattcgag
cgtaacgatgtcgattttcaacgcggtaccttccgcgttcgtggcgataccctcgatatt
attcccgcgaacgctgaaaccgccatccgggttgagttctggggcgatgagattgagcgg
attgtcgaacttgacccgcttaccggagaggtgttgctgaagcatacggcggttgaaatt
tatccggctaagcacttcgtcaccaccaaagagaagctacaattggcgattgtgagcatc
caagccgagctgaacgaacggttacaagaattagaagctgccggcaagttactcgaagcg
caacggctgaaacaacgcacgctgtacgacctcgaaatgctgagtgaagtgggctactgt
agcgggattgagaactattcgcgccatctcgacggacgcgcacccggtcagacaccgtgg
acattgctcgattattttcccgatgattttttgatgtttattgacgaaagtcacatcacc
attccccagttgcgcggtatgtacaacggggaccgtcagcgtaaacagacattggttgat
tacggttttcgcttaccgtcggcactcgataaccgcccactcaagtttgaagagtttgag
cagcacgtctatcaggtgatctacgtctcggcaacccccggtccctacgagcgagaaaag
agtgaacagattgttgagcagattatccgtccgaccggtctgctcgatccggaaatcgag
gtgcgcccgacgcgcgggcaaatcgatgatctgctcggcgagatacggcgacgggtagaa
cgtaaacagcgcgtgttggtaacgactctcaccaaacgcatggccgaagatttggccgac
tacctcaaagagatgggggtacgcacgatgtacctccacgccgatatcgataccatcgag
cgggtagagattctgcgtgatctgcggcttggagtgtatgatgtagtcgtggggattaac
ctgttgcgtgaggggcttgatctccctgaagtgagtttggtggcgatcctcgatgcggat
aaagaggggtatcttcgctcagagacatcgcttattcagatcattggtcgagcggcgcgt
catatcgagggtaaagtgatcatgtacgctgataccatcacccgttcgatggaagtcgcc
attcgtgagacgcaacgccgacgtgagattcagatggcgcacaatgtgcggcacggcatt
acgccgcaaggaatcgcaaaaggggtacgtgatttgaccgaccgcattcgcaaggtggct
gaagagcgcggtgagtacgtgaccactccagagaccgccgtaccggttgatttgccacgt
gatgaagtgttgaagctgatcaaagacctcgagaagcagatgaaacaggccgccaaagcg
cttgcgtttgagaaagcagcggcgttgcgtgatcagatcgtcgagctgcgacaggcctta
gcactgagtgagtag
DBGET
integrated database retrieval system
