Chloroflexus aggregans: Cagg_1887
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Entry
Cagg_1887 CDS
T00824
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cag
Chloroflexus aggregans
Pathway
cag03410
Base excision repair
cag03430
Mismatch repair
cag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cagg_1887
03430 Mismatch repair
Cagg_1887
03440 Homologous recombination
Cagg_1887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cag03400
]
Cagg_1887
DNA repair and recombination proteins [BR:
cag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Cagg_1887
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cagg_1887
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cagg_1887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ACL24782
UniProt:
B8GBF4
LinkDB
All DBs
Position
complement(2314601..2316313)
Genome browser
AA seq
570 aa
AA seq
DB search
MSARRQRWEVRPPAPATFIAQLNLHPVLATLLYQRGLHEPEAAHAFLAADYTSGLHDPLR
MRGMAEAAARIATAIDRGERMAVYGDFDVDGVTAVALLTQAIRAMGGKIRPYIPHRAREG
YGLNNVAIGQLAADGVRLLITVDCGISNVAEVVEAKRLGMDVIVTDHHHPPDELPSADAV
INPKQPDCAYPFKGLVGVGIAFKLVQALARYGKRPAHLRGRDLLDLVALGTIADMGPLVD
ENRVLVRAGLLALNETNRPGVRSLITVAGLTPGAVDSGGVTFSLAPRLNAAGRLDDARRA
YELLLADDQATADAIAADLHATNRERQSMTRQLQTIAEELINASGRAEHPLIVLTNPNFN
AGLLGLVAARLVERYHRPVVVIEQGSETSRGSARSIPGFNIIELLDQCADLFVRYGGHTA
AAGFTIHTANIPVLEQRLLALGKQYLKEELLTPRLLIDAKLPLDELSWDVYYAIQQLEPF
GHCNPTPMFMAPNVTVIDPQTTTTGDHLRMRVRAGTNVYEAIGFNFGHFAAALQRHPTVD
LAYQLAVDEWNGQRRMRLLVRDFRRAGQGG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcgccgtcagcgctgggaggtacgtccaccggctcccgccacgttcatcgcc
caactaaacctccatcccgtactcgcgaccctgctgtaccagcgcgggcttcacgaaccg
gaagcagcgcatgcgtttctggccgccgattacacctccggcttgcacgatccactgcgc
atgcgtggtatggcagaagcagcagctcggatcgccaccgccatcgatcgcggtgaacgc
atggccgtctatggcgactttgatgttgatggggtcacggcggttgcgctgctcacccag
gctatccgggcgatgggagggaagatccgaccatacattcctcaccgggcccgcgaaggt
tatggtctcaacaatgtggcaatcggtcagttggctgccgacggtgttcgactgctcatt
accgtcgattgtggtatctcgaacgtggctgaagtcgtcgaggccaaacgactggggatg
gatgtgatcgtgaccgaccatcaccaccccccagacgagttgccatcggctgatgccgtc
atcaatcctaaacaacccgattgcgcgtatcctttcaaagggctggtaggcgtcggcatt
gcgttcaaattggtgcaggcactggcccgttacggaaaacgtccggctcacttgcgtggg
cgtgatttgctcgatttggttgcattgggaacaatagccgacatgggtccgctcgttgac
gagaatcgggtattggtacgggcaggcttacttgcgctgaacgagacgaaccgacccggc
gtgcgctcattgatcacggtagccggtctgacaccgggtgccgtcgatagcggaggtgtt
acctttagtctggctcctcgcctcaatgctgccggtcggctcgacgatgcgcgccgcgcc
tacgaattgttgctcgccgacgatcaggccaccgccgatgcgattgccgccgacttgcat
gctaccaaccgtgagcgacagagcatgacccgtcagttacagacgattgccgaagaatta
atcaatgcgagcggtcgggctgagcaccccttgatcgtactaaccaacccgaactttaac
gccggtctcctcggtttggtcgctgcgcggttggtcgaacgttatcatcgcccggtggtc
gtcatcgaacaaggtagcgaaacgtcacgcggctcggcacggtcgatccccggtttcaat
atcatcgagctgctcgatcagtgtgccgatctcttcgttcgctacgggggacatacagcc
gcagccggctttaccatccataccgccaacattccggtgctcgaacaacgcctgttggcg
ctagggaaacagtatctgaaagaagaacttctaacgccaaggttactgatcgacgcgaaa
ctacccctcgatgaactgtcgtgggatgtctactacgctatccaacaactcgaaccgttc
gggcattgcaatccaacaccgatgtttatggctcctaacgtgacggtgatcgatccgcag
acaaccactaccggcgatcatctgcgtatgcgagtacgcgccggtactaacgtctatgaa
gcgattgggtttaacttcggtcacttcgctgctgccctccagcgtcatcccaccgtcgac
cttgcttaccaactcgcggtcgatgaatggaacggtcagcgccggatgcgtctgttagta
cgtgattttcggcgggcagggcaaggagggtaa
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