Chloroflexus aggregans: Cagg_1911
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Entry
Cagg_1911 CDS
T00824
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cag
Chloroflexus aggregans
Pathway
cag03420
Nucleotide excision repair
cag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cagg_1911
03430 Mismatch repair
Cagg_1911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cag03400
]
Cagg_1911
Enzymes [BR:
cag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cagg_1911
DNA repair and recombination proteins [BR:
cag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cagg_1911
MMR (mismatch excision repair)
Other MMR factors
Cagg_1911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DEAD
HEAT_SCC3-SA
Motif
Other DBs
NCBI-ProteinID:
ACL24806
UniProt:
B8GBH8
LinkDB
All DBs
Position
2342304..2344532
Genome browser
AA seq
742 aa
AA seq
DB search
MTTTDLLANLNPQQQRAVTTVTGPVLVLAGPGSGKTRVLTHRIAYLIDEVGVDPLQILAV
TFTNKAAREMRERLMALLGEAIAHDLTVGTFHSICARWLRRDIVHLGRERDFVIYDTDDQ
ERLLKRVLRELNLNEKQHLPRAILSAISHAKNELVDPEEFARHARTYFDEIVARCYARYQ
ALLYESNALDFDDLLGETVRLFSNYPAVLAEYHQRYRFLLVDEYQDTNRAQYLLVRALAE
RDRNLFVVGDEAQSIYAWRGADIRNILQFEHDYPDATVIMLEQNYRSTQAILDAAQALIN
ASPQRKYAKRLWTTNGTGDQVVLYEAANDEDEAAFAVSEIMRLIAEGTARPGDCAIMYRM
NAQSRLVEEALIQSHLPYQVIGGVRFYERKEVKDVLAYLRLVANPYDSVSLQRVINWPGR
GIGERTVNELLVWATRLGVPLYQALSELADETTEYPFAARARNALLDFYRLIGEFHSLRQ
RMPLGELIDYLLMRIEAQATLYQEYEAEEAEDRWRNVQELRNAAINYANLPIEHQLAAFL
EDIALVADTDTLDRNNDVVTCITLHQAKGLEFPYVFVLGVEEGLLPHSRSTNDRNQLEEE
RRLLYVGMTRAQRRLYLSYAAQRAMFGRVTVCSRSRFLADIPPTSLKLLRRRGYRAVTVS
QTTMFNQRMLTPDHHDKRTTPLPLPRQAAFVPGQRVYHATFGEGIVVSSRLIEGDEEVTV
RFADRERRLLASFARLQPLTDG
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaccgacctgctggccaacctgaacccacaacaacaacgcgccgtaaccact
gttacggggccggtattggtgttggccgggccgggtagtggcaaaacgcgcgttctcacc
caccgcatcgcctacctgattgacgaagttggcgttgatccgcttcagattttggccgtc
accttcaccaacaaagcggcccgcgaaatgcgcgagcgcctgatggcactgctcggcgaa
gccatcgcccacgacctgaccgtcgggaccttccattccatctgcgctcgctggctacgc
cgtgatattgttcatctgggtcgtgaacgcgattttgtcatctatgacaccgatgatcaa
gaacgcctgctcaaacgggtattgcgagagctaaacctcaacgagaaacaacatctaccc
cgtgccattctcagtgctatttcgcatgccaagaacgagcttgttgatccagaggagttt
gcccgccacgcacgcacctatttcgacgagatagtagcacgctgctacgcccgttatcaa
gctctcctctacgaaagtaacgcactcgactttgacgatctccttggcgagacggtgcgt
ttgtttagcaactatccggcggtattggccgaatatcaccaacgctaccgctttttgctg
gttgatgaatatcaagataccaaccgtgcgcagtatttgctggtacgcgcgttggccgaa
cgcgaccgtaatctgttcgtggttggtgatgaggcgcagagcatctatgcgtggcgcggg
gccgatattcgcaacattttgcaattcgagcacgattatcccgatgcgacggtgatcatg
ctcgaacaaaattatcgtagtacgcaggcaatcctcgacgctgcccaagcgctgatcaac
gctagtccacaacgtaagtatgcaaaacggctctggacgacaaacggaacgggtgatcag
gtcgtgctgtatgaagcagcgaatgatgaagacgaagccgcgttcgccgttagtgaaata
atgcgcctcattgccgaaggcacagcgcggcccggtgattgtgcaattatgtaccgaatg
aacgcacaatcgcgtctggtagaagaggcgttaatccagtcacacctcccctatcaagta
atcggtggggtgcgcttctacgagcgtaaagaggtgaaagatgtgcttgcctacttacgc
ctggtcgcgaatccctacgacagtgtgagtctgcaacgagtgatcaattggccgggacgc
gggattggcgaacgcacggtcaacgaattacttgtgtgggcaactcggcttggtgtccca
ctgtatcaggcgctcagtgaactggccgatgagacgaccgaatacccttttgctgcacgc
gcacgaaacgcactgctcgatttttaccggctcatcggcgaatttcacagccttcgccaa
cgcatgccgcttggtgaactgatcgattacctgttgatgcgcatcgaagctcaagcgaca
ttgtatcaagagtacgaagcggaggaagccgaagatcgctggcgcaacgtgcaagagttg
cgcaacgcagcgatcaattacgctaatctaccgattgaacatcaattagcagcatttctc
gaagatattgcgttggtcgccgataccgacacgctcgaccgcaacaatgatgtggtgacg
tgcatcaccctccatcaggccaaaggtcttgagtttccgtatgtctttgtgcttggggta
gaagagggcttacttccgcacagtcggtctaccaatgatcgcaaccaactggaagaagaa
cgacgcttgctctacgtgggaatgacgcgggcgcaacgccggttgtatctcagctatgcg
gcccaacgtgcgatgtttggccgtgtaacggtttgttcccgttctcgctttttggccgat
attcccccaacgtcactcaaactcttgcgccgccgtggctatcgtgctgtgaccgtctcc
cagaccacgatgttcaaccaacgcatgttgacccctgatcatcacgataagcgcacgaca
ccactgcccctaccgcgtcaagctgccttcgtccccggtcagcgcgtctatcacgcaacc
tttggtgaaggtattgtcgtcagtagtcgcctgatcgaaggcgacgaagaggtaaccgtt
cgctttgccgaccgtgagcggcggttgctggccagctttgcccgtctccaaccactcacg
gacggataa
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