Chloroflexus aggregans: Cagg_2499
Help
Entry
Cagg_2499 CDS
T00824
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cag
Chloroflexus aggregans
Pathway
cag03030
DNA replication
cag03430
Mismatch repair
cag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cagg_2499
03430 Mismatch repair
Cagg_2499
03440 Homologous recombination
Cagg_2499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cag03032
]
Cagg_2499
03400 DNA repair and recombination proteins [BR:
cag03400
]
Cagg_2499
Enzymes [BR:
cag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cagg_2499
DNA replication proteins [BR:
cag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cagg_2499
DNA repair and recombination proteins [BR:
cag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cagg_2499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
PHP_C
HHH_3
HROB
T2SSK
Ret2_MD
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ACL25370
UniProt:
B8G3W8
LinkDB
All DBs
Position
complement(3039659..3043441)
Genome browser
AA seq
1260 aa
AA seq
DB search
MHDFVHLHVHSEYSLLDGYATTKGIVQRAADLGMDSIALTDHGVLYGAMEFYEAAKKAGI
RPIIGVEAYIAPGSLSDPMTKGAKNYFHLLLLAQNETGYRNLVKLTTRAHLDGMGKGVFA
RPRIDRHLLETYHEGLIVTSACVAGELLHHLKHGDRHTAVETAAYYRDLLGPDRYYIELQ
LHDNTPELEPLNDELVRIARELGIPLVATSDAHFIHPEDKETQHKVMAMGMNMTYAEFCT
RGYAMDESYHIMSGEAMWARFKRYGTEPLENTRRISDMCRLKLEFGRVQLPVFELPEGHD
AASYLRLVCEEGLMRRFNGQPPETYLRRLEYELDVINQTGFPDYMLIVWDYVKFARSRGI
PCLPRGSAGASLVLYALGITDVDPVKNKLLFERFLSPERLEMPDIDTDFADSRRQEILDY
IANKYGRENVAQIITYGTLGAKAAIRDMGRVLGLDPGEVDRVAKLIPSLPVGTTIAQAIE
RVPELKQIYETQPHLRELLIEAQKVEGRMRSVGTHACGVVVSRTPLEELVPLQRTTKDEH
ALMAAFEGATLAKMGLLKMDILGLTNLSVVAEALKYIEQTTGRRMWLDEIPLDDPKVFAA
LGRGETKNVFQLESAGMTRYLMQLQPTRVEDLYAMVALYRPGPLEQIPVYIQNKHNPSQI
RYLHPVLEPILSDTYGVIVYQEQIMQLLQTVADYTLGQAYIVIKAISKKNKELMAENEAI
FKQGCQRKGISKEVADQLWELILPFAGYSFNRPHATLYGLLSYQTAWLKVNYPVEYMTAV
LTGAGGVIEDVTKAALEARRLGVAVLPPDVNRSHKGFTIEPLSPPLPEGVKYDRGIRFGL
MAIKNVGEGPVEAIIAAREAGGPFRSLEDLCARVDRHALNKRTLESLIKAGALDSLPGSR
RQKLAILDQAINAGVEAQKARDIGQSSLFDIFGESNTGSPNVARIPLPIITETPAEQKEV
LRWEKELLGLNLSDDPIAKALEGIDLTGVTDLGSLEEEHVGETLTFVGVLSGVRRIATKK
GDSMVVATLEDMTGSIEIVVFPKVLAKAADLLQNDAVVRVTAKVDNRRDTPQLVVESVET
PSTIDQTTSPQPVEMDLEGMSDELSAELATDVPISLPDPSPQPPSVTTVSSPPAPSVTTT
PPTAKPPTVRPRQPVKLANGNGQGNSNGQSKSGEPPRTDGPPSRNLRIYLPRTNNFDADV
ALMQHIHSLLSASQGNDHVTLYLPNGVGMVVLQSQQTIELSDALLNELRQLLGHERVLAA
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacttcgttcacctgcatgtccactccgaatacagcctcctcgacggctatgcc
acgaccaaaggtatcgttcagcgcgccgccgatttgggcatggacagtatcgccctcacc
gatcacggtgttctctacggcgcaatggagttttacgaggcagccaaaaaagccggtatc
cgcccgatcatcggcgtcgaagcgtacatagcccccggctcattgtccgacccgatgaca
aaaggggcgaaaaactattttcacctcctcctgttggcgcaaaacgagaccggctaccgc
aatttggtcaaactcacgacccgcgcccatctcgatggcatggggaaaggggtgtttgcg
cgcccccgcatcgaccgtcacctgctcgaaacgtatcacgagggcctgatcgtcacgtcg
gcatgcgtagccggcgagctcttgcatcacctcaaacacggtgaccgtcacactgccgtc
gagaccgcagcgtactaccgtgatctgctcggtcccgaccgctactacatcgaattacaa
ctccacgacaatacacccgaactcgagccactcaatgatgaattggtgcgcatcgcccgc
gaactcggcatccccctcgttgcgaccagcgatgcccacttcattcaccctgaggataaa
gagacccagcataaggtgatggcaatgggcatgaacatgacctacgccgagttctgtacc
cgcggatatgcgatggacgaaagctatcacattatgtcaggcgaagcgatgtgggcgcga
tttaaacgctatggcaccgagccactcgaaaatacccgccgaatttccgatatgtgccgg
ctcaagctcgagtttgggcgggtgcagttaccggtgttcgagctgcctgaaggtcacgat
gccgcatcatatctgcgcctcgtctgcgaagaaggcctgatgcgtcgcttcaacggtcag
ccgcccgaaacatatctgcgccggttggagtatgagcttgatgtgatcaatcagaccggc
ttccccgactatatgttgatcgtctgggactacgtgaaattcgcccgctcgcgcggtatt
ccctgtctcccgcgtggttcggccggtgcatcgctcgtcctctacgccctcggcattacc
gatgtcgatccggtcaagaataaactgctcttcgagcgcttcctctcccccgaacgactg
gagatgcccgacatcgacaccgactttgccgactcacgtcgccaagagattctcgattac
attgccaataaatacgggcgcgagaatgtggcccagatcattacctacggcaccctcggc
gccaaggccgccatccgcgatatgggtcgcgtcctcggtctcgatcccggcgaggttgac
cgcgtggcgaaactgattccgtcgctgccggtgggcacgacgatcgcgcaggcgatcgag
cgggtgcctgaattgaagcagatctacgagactcagccccacttgcgcgagttgctgatc
gaagcgcagaaggtcgagggccggatgcgctcggttggcacccatgcctgtggcgtggtg
gtcagccgcaccccgctcgaagagcttgtaccgctccaacgcaccaccaaagacgagcat
gcgctgatggccgcgtttgaaggggcaaccctggccaagatgggtctgctcaaaatggac
attctcggtctcaccaacttgtcggtggtggccgaggcgctgaagtatattgagcagacg
accggtcgccgcatgtggctcgatgagattccgctcgatgatccgaaggtgtttgcggcg
ttgggccgcggcgagaccaagaatgtgttccagcttgaatcggcagggatgacccgctac
ctcatgcagttgcaaccgacccgcgttgaagacctctacgcgatggtcgcgctctaccgg
cccggcccgctcgagcagattccggtctatatccagaataagcataatccctcccaaatc
cgctatctccacccggtgctcgagccgattttgtccgatacctacggtgtgatcgtctac
caagagcagattatgcaattgctccagaccgtcgccgattatacgctcggtcaagcgtat
atcgtgatcaaggccattagcaagaagaacaaggagctaatggccgagaacgaggcgatc
tttaaacaggggtgccagcgcaaaggcattagcaaagaggtggccgaccagctttgggag
ctgatcttgcccttcgccggctattcgttcaaccggcctcacgctaccctctacggcctg
ctcagctatcagacggcgtggctcaaggtgaattatccggttgagtatatgaccgcagtg
ctcaccggtgccggaggggtgattgaagatgtgaccaaggccgccctcgaggcgcgccga
ttgggcgtcgccgtattgccacccgatgtcaaccgctcacacaagggctttaccatcgag
ccgttatcgccaccacttcccgaaggagtgaagtacgaccgcgggattcgctttggcctg
atggcaattaagaatgttggtgaaggaccggttgaggcaatcatcgctgcccgcgaggcc
ggtggccccttccggtcactggaagacctctgcgcccgcgtcgatcgccacgccctcaac
aagcgaacgcttgagagtctgattaaggccggtgcgctcgactcactgcccgggagccgt
cgccaaaagcttgcaattctcgatcaggcgataaacgcaggcgttgaagcgcagaaggcg
cgcgacatcggccagagcagtctgttcgatatcttcggggaaagcaacaccggcagcccg
aatgtcgctcgtatccctctgccaatcatcaccgagacgcccgccgagcagaaagaggtg
ctgcgatgggagaaagaactgctcggtctgaacctctccgatgaccctatcgcgaaagca
cttgaagggatcgacctcaccggcgtcaccgacctcggatcgcttgaagaggagcatgtt
ggcgagacgctgaccttcgtcggtgtcctgagcggagtgcgccggattgccaccaagaag
ggcgattcgatggtggtggcaaccctcgaagatatgaccgggagcatcgagatcgtggtg
tttccgaaggtgttggcaaaagccgccgatctgctccaaaatgatgcggtagtacgggtg
acggcaaaagttgataaccggcgcgatactccgcaactcgtcgtagagagcgttgaaacg
ccatctaccatcgaccaaacgaccagccctcaaccggttgagatggatctcgaagggatg
agtgatgagctgagcgcagaattggcgaccgatgtacccatctccctcccggatccatca
ccccaaccaccatcggttaccacggtgtcgtcacccccggctccatcagtgaccaccacc
ccgccaacggccaaaccaccaacagtacgcccgcgccaaccggtcaaactcgccaacggg
aacggccaaggaaatagcaacggacagagcaagagcggcgaaccaccccgcaccgacggg
ccgccgtcacgtaatttgcgcatctacctgccgcgtaccaataacttcgacgccgatgtc
gccctgatgcagcatattcacagcctgctcagcgccagccaaggcaatgatcacgtaacg
ctatacctgcccaatggggttgggatggtcgtgctgcaatcgcaacaaaccatcgaactg
tcagacgcgctgctcaacgaattgcgccagctcctcggccacgagcgggtcttggcggca
taa
DBGET
integrated database retrieval system
