Chloroflexus aggregans: Cagg_2706
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Entry
Cagg_2706 CDS
T00824
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cag
Chloroflexus aggregans
Pathway
cag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cagg_2706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cag03021
]
Cagg_2706
03400 DNA repair and recombination proteins [BR:
cag03400
]
Cagg_2706
Enzymes [BR:
cag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cagg_2706
Transcription machinery [BR:
cag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cagg_2706
DNA repair and recombination proteins [BR:
cag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cagg_2706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF2016
Motif
Other DBs
NCBI-ProteinID:
ACL25574
UniProt:
B8G4U8
LinkDB
All DBs
Position
complement(3313331..3317833)
Genome browser
AA seq
1500 aa
AA seq
DB search
MLEINDFNAIRISLASPEDIRSWSHGEVTKPETINYRTLKPERDGLFCERIFGPTKDWEC
FCGKYKRVRYKGVVCDKCGVEVTRAKVRRERMGHINLASPVSHIWFVKGTPSRLGLLLDI
SPRNLERVLYFASYIIVDVKEDMLQVAREMVQEEYAARREKIQKQAEEKRIELSTQLTQD
LGGMETAQRSTQRQIEEDYRRQRDELVGEAERLRERLEEMSGTLADEDIIFRGVTVVEEG
ELINDNTLDQLDELVEQELEVLEERRRRDLADAELLTDAERERKAYEATQEQERLQERLQ
RELDMLVREEKEKLEQLDKLKVGLIITENEYRQLRDVAPGVFRADMGAGAIRELLERHLN
LDKLAEELQAEIQTSQGQRRKKATKRLRIVEAFRKSGNRPEWMILTVLPVIPPDLRPMVQ
LDGGRFATSDLNDLYRRVINRNNRLKRLIELNAPEIIVRNEKRMLQEAVDALIDNGRRGR
AVSGKGKHRLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLQLHQCGLPKKMAL
ELFKPFVMRRLVERGVAHNIKNAKRAVERVRPEVWDALEEVIKDYLVLLNRAPSLHRLSI
QAFEAKLIEGSAIQLHPLVCAAFNADFDGDQMAVHVPLSRKAQEEARTRMLSKYNLLSPA
HGEPIITPSQDIVLGCYYLTMVRDGAKGTGKRFASIDEAMLAYEKGLIDIQAPIWIRMNG
SISGKSDRPVRELPPASDGTPRMVIETTIGRVLLNSELQPPLRFRNRLIDKKGLKEIIAD
CYQYYTSLRNLSEAQLNEVRAAHGNKHVQELARIYGSEMTAQQADRIKTLGFRYATLGGM
TIGIDDIEVPAKKYDIVREAEQQVAEVEKQFRRGLITEEERYQEVVRIWQEATKQTIAAV
KENLNPFGPVAMMSTSGARGNINQISQMAGMRGLMSDPTGRIIELPIKANFREGLSVLDY
FVSTHGGRKGLADTALRTADAGYLTRRLVDVAQDVIINIEDCGTEEGLWLHSADDGELME
KLQVRMLGRILAAPIYDKTTGELIADRNTEIDEELAEKIIAAGHESVFVRSPLTCQAEHG
LCRMCYGRNLATGKLVEIGEAVGIIAAQSIGEPGTQLTLRTFHTGGVASADDITQGLPRV
QEIFEARVPKGKALLAEIDGVVQIIREDEGVRKIRIVSTNVYTDEYPLTRGFTPVIESES
DVYEGQVIAEGPGGEQIIARLSGKAFIQSDRIIISQEDHEERELVVPHNARIRVENGDRV
MAGQQLTDGSANPQELLELQGREAVQRYLVNEAQKVYRSQGVNINDKHIEVIARQMLRRV
RIEEPGDTGLLPGELIDSAEFRRLNNDIVSQGGDPATAATVLLGITKASLNTDSFLSAAS
FQETTRVLTDAAIQGKVDYLRGLKENVVIGKLIPAGTGIEKRLERQHEDLISEMARMLEE
VQQAEKSAEPTTTALPTTNGHQAPQSDTDALLRARLEELLSGGNDHDDEEDSDHPDLSSL
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaattaacgacttcaatgccattcggatcagtctcgcttcacctgaagatatc
cgatcgtggtcgcacggcgaagtcacgaaacccgaaaccatcaactaccgcacgcttaaa
cctgaacgcgacggtctcttctgcgaacgtatttttggtccaacgaaagactgggaatgc
ttctgcgggaagtataagcgcgtgcgctataagggtgtcgtctgcgataagtgtggagtc
gaagtcacccgggctaaggtgcgacgtgagcgcatgggccatattaatctggcctcgccg
gtgagccacatctggtttgtcaaaggtactccctctcgccttggcctccttctcgatatt
tcgccgcgaaatcttgagcgtgtcctctatttcgcctcgtacatcattgtagatgtgaag
gaggatatgctccaggtggcacgcgagatggtacaggaggagtacgctgcgcgccgcgag
aagattcaaaagcaggccgaagagaagcggatcgagctgagtactcaactgacccaagac
ctcggcggtatggagacggcgcagcgcagcacccagcggcaaatcgaagaagattaccgc
cgtcagcgcgatgagttggtcggcgaagccgaacggctgcgtgagcggctggaagagatg
agcggtacgctggccgatgaagatattatcttccggggcgtgaccgtggtcgaagaaggt
gaactgattaacgacaacaccctcgaccagctcgatgaattggtcgaacaagaattggag
gtgctcgaagaacgccgtcgccgtgatctggctgatgccgagctgctgaccgacgccgag
cgcgagcgtaaggcgtatgaagctacccaagagcaggagcgattgcaagagcgcctgcaa
cgcgagctggatatgctggttcgcgaagagaaggaaaagctcgaacagctcgataaactg
aaggtgggcctgatcattaccgaaaacgagtaccggcagttacgcgatgttgcacccggt
gtcttccgtgctgatatgggggccggcgcgatccgcgagctgctcgaacggcacctgaac
ctcgataagctggccgaagagttgcaggccgagattcaaacatcacagggtcagcgccgg
aaaaaggcgacgaagcggctgcgcatcgttgaggcgttccgcaagagcggcaatcgcccg
gagtggatgatccttacggtactaccggttattccacccgacctgcgcccgatggtgcag
ctcgatggtggtcgctttgctacgagcgatctcaatgatctctatcgtcgggtgatcaac
cgcaataaccggctcaagcggctgatcgaactgaacgcgccggaaatcatcgtgcgtaat
gagaagcgcatgctgcaagaggcagttgatgcgctgatcgataacggtcggcgtgggcga
gcagttagcggtaaggggaagcatcgcctcaagagcctgagtgatatgctcaagggcaag
caaggccgcttccgccagaacctgctcggtaagcgtgtcgattattcgggccgttcggtg
atcgtggtaggccccaatctgcaactgcaccagtgcggtctgcccaagaaaatggccctt
gagctatttaagccctttgtgatgcgccgactggtcgaacgtggtgtcgcccataacatt
aagaacgctaagcgtgccgtcgaacgtgtgcgccctgaagtgtgggacgcactcgaagag
gtgattaaagactatctggtgctgctcaaccgcgcaccgtcgctgcaccggctctcgatt
caggcctttgaggccaagctcatcgagggatcggcgatccagcttcatccactcgtctgc
gccgcgtttaacgccgacttcgacggcgaccagatggcggttcacgtgccgctttcacgg
aaagcgcaggaagaggcacgcactcggatgctgagcaagtacaatctgttgagtccggcg
catggggaaccgattatcaccccttcgcaggacatcgtgcttggctgctactacctgaca
atggtgcgcgatggtgcgaagggaacgggtaagcggttcgcttcgatcgatgaggcgatg
ttggcctacgagaagggcttgatcgatattcaagcaccgatctggatccgtatgaatggt
tccatctctggtaagagcgaccgtcctgtgcgcgaattgccgccggccagcgatggtaca
ccgcgtatggtcattgaaacgacgatcggacgtgtgttgctcaatagcgagctgcaacca
ccattacgcttccgcaatcgcctgatcgacaagaagggcctgaaagagattatcgccgat
tgctaccagtattacaccagcttgcgcaatctgagcgaagcccagcttaacgaggtacgg
gcagcccatggcaataagcacgtccaagagttggcccgtatctacggttcggagatgacg
gcccagcaagccgaccgtattaagacactcggcttccgctacgctacgcttggcggtatg
acgatcgggattgacgatattgaagtgccggccaagaagtatgacatcgtgcgcgaagcc
gaacaacaggttgctgaagtcgagaaacagttccgccgtggtctgatcaccgaagaggag
cgctatcaagaggtggtacggatctggcaggaggcgactaagcaaaccatcgctgccgta
aaggagaatctgaaccccttcggccctgtggcgatgatgtcaacgtcgggcgctcgcggt
aacatcaaccagatctcacagatggccggtatgcgcgggttgatgtccgacccaaccgga
cggattatcgagctgccgattaaggccaacttccgcgagggtctgtcggtgctcgactac
ttcgtttcaacccacggtggacgtaagggtctggccgacaccgcgttgcgtaccgctgac
gccggttacctcactcgccggttggttgatgttgcgcaagatgtgattatcaacatcgaa
gattgcggtaccgaagagggtctgtggctccatagcgccgacgatggcgagttgatggaa
aagctacaggtccgtatgctcggacgcattcttgccgcaccgatctacgacaagacgacc
ggtgagttgatcgccgaccgcaacaccgagatcgatgaagaattggcagaaaaaattatc
gccgccggtcacgaatcggtctttgtccgttcgcctctgacgtgccaggccgaacacggt
ctttgccggatgtgctacggccgcaacctcgctaccggcaagttggtcgagatcggtgag
gcggttgggatcatcgccgcgcaatccatcggtgagccgggcacccagcttaccctgcga
acgttccacaccggtggtgtcgcctccgccgatgatattacgcagggtctgccgcgcgtg
caggagatcttcgaggcacgtgtgccgaagggtaaagcgctgctggccgaaatcgacggc
gtggtgcagatcatacgtgaagatgaaggggtacgtaagattcgcatcgtctcgaccaac
gtctacaccgatgagtacccgctaacgcgcggcttcacaccggtgatcgaatctgagagc
gatgtctatgaaggacaggtgatcgccgaaggaccgggtggtgagcagatcatcgctcgg
ctgagcgggaaggcctttattcagtctgaccggattatcattagtcaggaagatcacgaa
gagcgtgaattggtggtgccccacaatgctcgtattcgggtcgagaatggcgatcgggtt
atggccgggcaacagttaaccgacggtagtgccaatccgcaagagctgcttgaattgcaa
ggtcgagaagcagtgcaacgctacctggtcaacgaggcccaaaaggtctaccgctcgcag
ggcgtgaacatcaacgacaagcacattgaagtgattgcccgccagatgctgcgccgcgtg
cgcatcgaagaacccggtgataccggtctcttacccggcgagctgatcgatagtgccgaa
ttccgccgcctcaacaacgatattgtcagccaaggtggtgatccggcaaccgcggcaaca
gtgttgctgggcattaccaaagcctcactgaataccgacagcttcctctcggcggcttcg
ttccaagagacgacccgcgtgttgaccgatgctgccattcagggtaaggttgactatctg
cgcggtctgaaggagaacgttgtcatcggtaagctcatccctgccggaacggggatcgag
aagcggcttgaacgccaacacgaagatttgatcagcgagatggcacggatgctcgaagag
gtacagcaggccgagaagagtgccgagccaacgaccaccgccttgcctactaccaacggt
catcaggcaccgcagagcgataccgatgcgttattacgggcacggctcgaagagttgctg
tccggtggtaacgaccacgatgatgaagaggattcagatcatcccgatctgtcctcactg
tga
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integrated database retrieval system
